HBVdb

Dataset for nucleotide sequence P of genotype G

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*************************************************** ****** *********************
ATGCCCCTATCCTATCAACACTTCCGGAGACTACTGTTGTTAGACGAAGAGGCAGGTCCCCTCGAAGAAGAACTCCCTCG
                                                   a      t                     
                                                                                

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*********      ** **** ***** **** ******** *****  ************ *****************
CCTCGCAGACGAAGATCTCAATCGCCGCGTCGCAGAAGATCTGCATCTCCAGCTTCCCAATGTTAGTATTCCTTGGACTC
         gccttc  c    a     a    g        a     ta            a                 
                                 c                                              

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
******************************************************* ************************
ACAAGGTGGGAAACTTTACGGGGCTGTATTCTTCTACTATACCTGTCTTTAATCCTGATTGGCAAACTCCTTCTTTTCCA
                                                       g                        
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
***** ******************************** *********************** ******** *       
AATATCCATTTGCATCAAGACATTATAACTAAATGTGAACAATTTGTGGGCCCTCTCACAGTAAATGAGAAACGAAGATT
     a                                g                       g        g -------
                                                                                

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  **************************** ************************** ***********   ****** *
AAAACTAGTTATGCCTGCCAGATTTTTCCCAAACTCTACTAAATATTTACCATTAGACAAAGGTATCAAACCGTATTATC
--                            t                          t           ---      c 
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
**** ********* ******************************************** ******** ******** **
CAGAAAATGTAGTTAATCATTACTTCCAGACCAGACATTATTTACATACCCTTTGGAAGGCGGGTATTCTATATAAGAGA
    g         c                                            a        t        c  
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
***** ** ******** **************************************************************
GAAACATCCCGTAGCGCTTCATTTTGTGGGTCACCATATACTTGGGAACAAGATCTACAGCATGGGGCTTTCTTGGACGG
     g  a        c                                                              
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
****************** ********** ************* ****** ************************* ***
TCCCTCTCGAGTGGGGAAAGAACCTTTCCACCAGCAATCCTCTAGGATTCCTTCCCGATCACCAGTTGGACCCAGCATTC
                  g          g             g      t                         c   
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
******************************************************************** ******** **
AGAGCAAATACCAACAATCCAGATTGGGACTTCAATCCCAAAAAGGACCCTTGGCCAGAGGCCAACAAGGTAGGAGTTGG
                                                                    a        c  
                                                                                

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
****** ******************** ************ ************ **  **********************
AGCCTATGGACCCGGGTTCACCCCTCCACACGGAGGCCTTTTGGGGTGGAGCCCTCAGTCTCAGGGCACACTAACAACTT
      c                    g            c            t  ca                      
                                                                                

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
* **************  ********************************** ***************** ** ******
TGCCAGCAGATCCGCCTCCTGCCTCCACCAATCGTCAGTCAGGGAGGCAGCCTACTCCCATCTCTCCACCACTAAGAGAC
 a              ca                                  g                 t  g      
                                                                                

       890       900       910       920       930       940       950       960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*************** *******   *** **    ************** ********** ******            
AGTCATCCTCAGGCCATGCAGTGGAACTCTACAGCATTCCACCAAGCTCTACAAAATCCCAAAGTCAGGGGCCTGTATtT
               c       ---   c  ccag              g          c      ----------c-
                                                                              - 

       970       980       990      1000      1010      1020      1030      1040
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 **********************  * *      * ** ***** *********** **  ** *********** * **
TCCTGCTGGTGGCTCCAGTTCAGGGATAGTGAACCCTGTTCCGACTATTGCCTCTCACATCTCGTCAATCTTCTCCAGGA
-                      aa c ccagga t  c     a           t  ca  a           g a  
                             a                                                  

      1050      1060      1070      1080      1090      1100      1110      1120
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 ***** ***** ****** ******** ************ ****************************** *  ****
TTGGGGACCCTGCACCGAACATGGAGAACATCACATCAGGATTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTC
c     g     t      t        t            c                              t gg    
                                                                           a    

      1130      1140      1150      1160      1170      1180      1190      1200
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 *********** ** ********** **** ************************************** ** ******
TTGTTGACAAGAATCCTCACAATACCGCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAGTGCCCGT
g           t  t          a    a                                      a  c      
                                                                                

      1210      1220      1230      1240      1250      1260      1270      1280
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
******************************************** *************************** *******
GTGTCCTGGCCTAAATTCGCAGTCCCCAACCTCCAATCACTCACCAATCTCCTGTCCTCCAACTTGTCCTGGCTATCGCT
                                            t                           a       
                                                                                

      1290      1300      1310      1320      1330      1340      1350      1360
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*******  ***********************************************************************
GGATGTGTCTGCGGCGTTTTATCATATTCCTCTTCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTAT
       gt                                                                       
                                                                                

      1370      1380      1390      1400      1410      1420      1430      1440
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*********************** ****** ********** ******** ************************ ****
CAAGGTATGTTGCCCGTTTGTCCTCTGATTCCAGGATCCTCGACCACCAGTACGGGACCCTGCAAAACCTGCACGACTCC
                       c      t          c        c                        t    
                                                                                

      1450      1460      1470      1480      1490      1500      1510      1520
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
************************************** ***** ******  ***************************
TGCTCAAGGCAACTCTATGTATCCCTCATGTTGCTGTACAAAACCTTCGGACGGAAATTGCACCTGTATTCCCATCCCAT
                                      t     t      aa                           
                                                                                

      1530      1540      1550      1560      1570      1580      1590      1600
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
******************************* **** ***** ********* ***************************
CATCTTGGGCTTTCGCAAAATACCTATGGGAGTGGGCCTCAGTCCGTTTCTCtTGGCTCAGTTTACTAGTGCCATTTGTT
                               t    t     c         a                           
                               c                                                

      1610      1620      1630      1640      1650      1660      1670      1680
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
***************************** ************** * ******************************** 
CAGTGGTTCGTAGGGCTTTCCCCCACTGTCTGGCTTTCAGCTATaTgGATGATGTGGTATTGGGGGCCAAATCTGTACAA
                             t              g t                                g
                                              c                                 

      1690      1700      1710      1720      1730      1740      1750      1760
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
**************** ************************ *************** ****** *  ****** *****
CATCTTGAGTCCCTTTaTACCGCTGTTACCAATTTTCTTTTGTCTTTGGGTATACATCTAAACCcTAACAAAACAAAAAG
                t                        t               t      a gc      g     
                                                                                

      1770      1780      1790      1800      1810      1820      1830      1840
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*****************  *********** ***************************** ********* ** * ****
ATGGGGTTATTCCTTAAATTTTATGGGATATGTAATTGGAAGTTGGGGTACTTTGCCACAAGAACACATCACACAgAAAA
                 rc           c                             g         g  a a    
                                                                                

      1850      1860      1870      1880      1890      1900      1910      1920
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
****** ******* ******* ***************************** ****** *****  ****** ***** 
TTAAGCAATGTTTTCGGAAACTCCCTGTTAACAGGCCAATTGATTGGAAAGTCTGTCAACGAATAACTGGTCTGTTGGGT
      r       g       a                             t      a     gt      t     a
                                                                                

      1930      1940      1950      1960      1970      1980      1990      2000
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
************** *********************************************** * ***************
TTCGCTGCTCCTTTTACCCAATGTGGTTACCCTGCCTTAATGCCTTTATATGCATGTATACAAGCTAAGCAGGCTTTTAC
              c                                               g t               
                                                                                

      2010      2020      2030      2040      2050      2060      2070      2080
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
****************************************  ************ *************************
TTTCTCGCCAACTTATAAGGCCTTTCTCTGTAAACAATACATGAACCTTTACCCcGTTGCTAGGCAACGGCCCGGTCTGT
                                        cg            t                         
                                                                                

      2090      2100      2110      2120      2130      2140      2150      2160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
************************************* *********** ******************************
GCCAAGTGTTTGCTGACGCAACCCCCACTGGTTGGGGCTTGGCCATCGGcCATCAGCGCATGCGTGGAACCTTTGTGGCT
                                     g           a                              
                                                                                

      2170      2180      2190      2200      2210      2220      2230      2240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*********************** ***   ********************************** ********* *****
CCTCTGCCGATCCATACTGCGGAACTCCTAGCTGCTTGTTTTGCTCGCAGCCGGTCTGGAGCAAAACTCATTGGGACTGA
                       t   agc                                  c         a     
                                                                                

      2250      2260      2270      2280      2290      2300      2310      2320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*************** ************** ******** **** ************ ****  * ** ****   ****
CAATTCTGTCGTCCTTTCTCGGAAATATACATCCTTTCCATGGCTGCTAGGCTGTGCTGCCAACTGGATCCTTCGCGGGA
               c              c        c    a            c    ta c  c    tca    
                                                              c                 

      2330      2340      2350      2360      2370      2380      2390      2400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
******************** ***** *********************** **** ********* *** *** ******
CGTCCTTTGTTTACGTCCCGTCAGCGCTGAATCCAGCGGACGACCCCTCCCGGGGCCGTTTGGGGCTCTGTCGCCCCCTT
                    a     t                       t    t         a   a   a      
                                                                                

      2410      2420      2430      2440      2450      2460      2470      2480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
****** ** *********** ***************** *************** ****** *****************
CTCCGTCTGCCGTTCCTGCCGACCACGGGGCGCACCTCTCTTTACGCGGTCTCCCCGTCTGTtCCTTCTCATCTGCCGGA
      t  t           c                 a               g      g                 
                                                                                

      2490      2500      2510      2520         
....:....|....:....|....:....|....:....|....:....
************ ********    ** *********************
CCGTGTGCACTTCGCTTCACCTCTGCACGTTACATGGAAACCGCCATGA
            t        aagt  t                     
                                                 
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