HBVdb

Dataset for nucleotide sequence PreS2 of genotype C

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                               *
ATGCAGTGGAAcTCCAcaACATTCCACCAAGCTCTGCTAGAtCCCAGAGTGAGGGGCCTaTActTTCCTGCTGGTGGCTC
gca  a     t    gc  t  t  t  ga    at    c  a a   a aaa t  g  tcac              
                    g                                      t                    
                    c                                      c                    

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                   *  *                                              **         
cAGTTCCGGAACAGTAAACCCTGTTCCGACTACTGCCTCaCCCATATCGTCAATCTTCTCGAGGACTGGGGACCCTGCAC
a    ta  g    c  g            c    t  tt    cc  a             a  t            g 
              g                                                                 
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 *     *   *                **     *  *    *        *            *  *         * 
CGAAcATGGAGAaCACaACATCAGGATTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAGAATC
    t       g   cg                           c           t               a    
                                                                                
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*             **  *    *     *  *    *               **            *          * 
CTCACAATACCACAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAGCACCCACGTGTCCTGGCCAAAA
           g g      c                      g           a      aga               
                                                                t               
                                                                g               

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *         *        *           *           *     *     **    *     *         
---TTcGCAGTCCCCAACCTCCAATCACTCACCAACCTCTTGTCCTCCAAtTTGTCCTGGcTATCGCTGGATGTGTCTGC
     t                       t  t      c        g cc        t     t             
                                                            a                   
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
          **     *        * *         *     * *      *       **  *         *    
GGCGTTTTATCATaTTCCTCTTCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTAcCAAGGTATGTTG
             c                            c      a g       g      gtagg         
                                                                                
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *     *                                                       *              
CCCGTTTGTCCTCTACTTCCAG------GAA---CAT------CAACtACCAGCACGGGACCATGCAAGACCTGCACGAt
               a              t    ta       c  c  a ct  a  g  c    ga        a c
                                   c           a                               g
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                 *                    *       *                 *     *    *  **
TCCTGCTCAAGGAACCTCTATGTTTCCCTCTTGTTGCTGTACAAAACCTTCGGACGGAAAcTGCACTTGTATTCCCATCC
aa        aac a     c a       a  c                     ac   t     c             
                                                                                
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*                           ***                      *                          
CATCATCcTGGGCTTTCGCAAGATTCCTATGGGAGTGGGCCTCAGTCCGTTTCTCCTGGCTCAGTTTACTAGTGCCATTT
    g  t          t  a  a                              a                c       
                                                       t                        
                                                                                

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *              *              **   **     *        *     *      *            
GTTCAGTGGTTCGtAGGGCTTTCCCCCACTGTTTGGCTTTCAGTTATATGGATGATGTGGTATTGGGGGCCAAGTCTGTA
        a    c                  c          c   g t      a    t        g   a     
                                                                                
                                                                                

       810       820       830       840       850       860    
....:....|....:....|....:....|....:....|....:....|....:....|....
   *     *      *     *        *        *           *    *      
CAACATCTTGAgTCCCTTTTTACCtCTaTTACCAATTTTCTTTTGTCTTTGGGTATACATTTgA
     c     ag      a    g  g      c      gc a   c    c      c a 
                                          g                     
                                                                
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