HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence PreS2 of genotype C

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

ATGCAGTGGAACTCCAcaACATTCCACCAAGCTCTGCTAGAtCCCAGAGTGAGGGGCCTaTActTTCCTGCTGGTGGCTC
gca  a     t    gc  t  t  t  ga    at    c  a a   acaa  t  t  tcac
                    c                                      c
                    g                                      g

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                   *
cAGTTCCGGAACAGTAAACCCTGTTCCGACTACTGCCTCaCCCATATCGTCAATCTTCTCGAGGACTGGGGACCCTGCAC
a     a  g   ac  g            c t  t   t    cc  a          t  a  t            g



       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                            **        *
CGAAcATGGAGAgCACaACATCAGGATTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAGAATC
    t       a   cg                           c           t        c        a
    a


       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*                      *             *               **
CTCACAATACCACAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAGCACCCACGTGTCCTGGCCAAAA
           g g                             g           a      aga
                                                                t
                                                                g

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
             *                    *                        *
---TTcGCAGTCCCCAACCTCCAATCACTCACCAACCTCTTGTCCTCCAAtTTGTCCTGGcTATCGCTGGATGTGTCTGC
     t                       t  t      c        g c         t     t
                                                            a


       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                      *     * *
GGCGTTTTATCATaTTCCTCTTCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTACCAAGGTATGTTG
      c      c                            c      a g       g    t gt gg



       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *
CCCGTTTGTCCTCTACTTCCAGGAACA------TCA---ACt---ACCAGCACGGGACCATGCAAGACCTGCACGAtTCC
               a        t t      a       c     a ct  a  g  c    ga        a ca
                          c              a                                  g


       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                           *     *                 *    *   **
TGCTCAAGGAACCTCTATGTTTCCCTCTTGTTGCTGTACAAAACCTTCGGACGGAAAcTGCACTTGTATTCCCATCCCAT
       a c a     c         a  c                    ta    t     c



       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                         *
CATCcTGGGCTTTCGCAAGATTCCTATGGGAGTGGGCCTCAGTCCGTTTCTCCTGGCTCAGTTTACTAGTGCCATTTGTT
g  t t        t  a                                 a                c
    a                                               t


       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                    *     *
CAGTGGTTCGTAGGGCTTTCCCCCACTGTTTGGCTTTCAGTTATATGGATGATGTGGTATTGGGGGCCAAGTCTGTACAA
     a    cc                 c          c  cg t           t        g   a



       810       820       830       840       850       860
....:....|....:....|....:....|....:....|....:....|....:....|.
      *                     *
CATCTTGAgTCCCTTTTTACCtCTaTTACCAATTTTCTTTTGTCTTTGGGTATACATTTgA
        ag      a    g  g      c      gc a   c           c-a-
                                                           -