HBVdb

Dataset for protein Pol of genotype F

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*****  * .  :*:   .:*           * ** *.:  ***.:* *.** .   *  *****:* * :*.    * 
MPLSYPHFRKLLLLDD--EAGPLEEELPRLADEgLNRRVAeDLNLQLPnVSIPWTHKVGNFTGLYSSTVPaFNPdWlTPS
            ee     xxxxxxxxx n d  h      h  d        x            t  sn s   
               h     l                     r  t        g            x   h v   
                                                                                
                                                                                

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
** ** * ::  .**. ***:*  *.  :** **  : *  ****   *.***:*    *****:: ** ****: *:**
FPDIHLHQDLIsKCEQFVGPLTKNELRRLKLvMPaRFfPKvTKYFPmeKGIKPYYPehaVNHYFKTRHYLHTLWKAGILY
  n    e h   r       h   x   i  sx y  l     ld        dnv     x             
           q                            h     i          qs                     
                                                                                
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   .:   ** ** *:** . *****:    *   : *   *. *: :  * **    .:**  :* *  ** ***.:*.
KRESTRSASFCGSPYSWEQELQHGSTSlNDkKgHGTESlCaQSsGiLsRpSAGSsiQsKFQQSRLGLQqkQGqLANGKQG
 xx  hx   x    t   k       i  s r     f t  t lpaxt    af g          hn  h       
     x             d          t            a                         r          
                              e            p                         x          
                              x                                                 

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 . *  .. .::. *     *....      .. ::   ***          *. : : .     :   ..         
RS-GRlRSrVHTPTRWPvGVEpsGTgCanNlASRSASCFHQSAVREkaNPSLSTSKRHtSTGhAVELnpVPPGsVrSeGK
    siwpw  s  la m sts rysy i  k t  s   eigket  c       s   ntm fhs ssdp g qs 
                         fh f  g    l    d  x           p   r e hiq   sl   k  
                         vd                                 d                 
                                                                                

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                    * : *:*:   * ** .:  * :.** *.:.:  * :*::* *:* .: .**********
GSVfsCWWLQFRDtEPCSDYCLSHIINLLEDWGPCyEHGqHhIRTPRTPARVTGGVFLVDKNPHNTTESRLVVDFSQFSR
 t sp       nak      x y     d     h   e y    k                q a              
   lx       h                      n     l                                      
   x                                                                            
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
. . ** **  *************:** *** *******:**************.**  * **:*. **       *:* 
GtTRVSWPKFAVPNLQSLTNLLSSNLSWLSLDVSAAFYHLPLHPAAMPHLLVGSSGLSRYVARLSStSRI----hDHQHG
 n                                                    c  pg       n       yn    
                                                                          f     
                                                                          n     
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
: * *:  *  ::* :*:**: * *****:***.*: **** ***: * ***:* **.*:  *:**.****:**   * *
TmQNLHNSCsRNLYVSLLLLFqTlGRKLHLYSHPIILGFRKIPMGVGLSPFLLAQFTSAICSVVRRAFPHCLAFSYMDDL
sl d       m  yk f           v            x   m x                   x v   
                     x x                                                        
                                                                                
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*****   : *:: : ::*:*:*:*::**.:******* * ***: **.:* ***:**  *:   : *:**.** **** 
VLGAKSVQHLESLYTAVTNFLLSVGIHLNTSKTKRWGYtLhFMGYVIGSWGsLPQDHIVhKiKdCFRKLPVNRPIDWKVC
     t                 l     aa       n n    i     a      iq lxe                
                                      s            t                            
                                                   x                            
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*  ***:.***  .*********:: * :**:***** *** **  ** :****.***.*********** ***:.:***
QRIVGLLGFAAPFTQCGYPALMPLYaCITAKQAFVFSPTYKAFLCkQYMNLYPVARQRPGLCQVFADATPTGWGLAIGHQ
                         t               t   q  ih    v   s                     
                         n                      a                               
                         x                                                      
                                                                                

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
* *..* ******** :*******.***: : ***** **. ***********:***** **.******.*****:****
RMRGTFVAPLPIHTAELLAACFARSRSGAnlIGTDNSVVLSRKYTSFPWLLGCAANWILRGTSFVYVPSALNPADDPSRG
 l                           ki          g                                      
                             tv                                                 
                             d                                                  
                             r                                                  

       810       820       830       840       850
....:....|....:....|....:....|....:....|....:....|
***: ** :   * ****  **:* .* **:  * ****:****  *. *
RLGlYRPLLRLpFQPTTGRTSLYAdSPSVPSHLPdRVHFASPLHVAWRPP
   vf      l r          a       v         dt k  
    c                   v                         
                                                  
                                                  
© 1998-2022Legal notice