HBVdb

Dataset for protein Pol of genotype F

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*****  * .  :*:   ::*  : ****:  * ** *.:  ***.:* *.** .   *  *****:* * :*.    * 
MPLSYPHFRKLLLLDD--EAGPLEEELPRLADEgLNRRVAeDLNLQLPNVSIPWTHKVGNFTGLYSSTVPaFNPdWlTPS
            ee             n d  h      h  d        x            t  sn s   
                                           r  t        g                h v   
                                                                                

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
**:** * ::  .**. ***:*  *.  :** **  : *. ****   *.***:*    *****:: ** ****: *:**
FPDIHLHQDLIsKCEQFVGPLTKNELRRLKLvMPaRFfPKvTKYFPmeKGIKPYYPehvVNHYFKTRHYLHTLWKAGILY
  n    e h   r       h   x   i  sx y  l     ld        dna     x             
           q                                  i          qs                     
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   .:   ** ** *:** : *****:    *   : *   *..*: :  * **    .:** *:* *  ** ***.:**
KRESTRSASFCGSPYSWEQELQHGSTSlNDsKgHGTESlCaQSsGiLsRPSAGSsiQgKFQQSRLGLQqkQGqLANGKQG
 xx  hx   x    t   k       i  k r     f t  t lpaxt    af s          hr  h       
                              t            a                         n          
                              e            p                         x          

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 . *  .. .::. *     *....      .. ::   ***          *. : * .     :   ..         
RS-GRlRSrVHTPTRWPvGVEpsgTgCanNlASRSASCFHQSAVREkaNPSLSTSKRHtSTGhAVELnsVPPGsVrSegK
    siwpw  s  la m sts rysy i  k t  s   edgket  c       s   ntm fhp ssdp g qs 
                         fh f  g    l    i  x               r e hiq   sl   k  
                           vd                                 d                 

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                    * : *:*:   * ** .:*:* :.** *.**:  * :**:* *:* .:*.**********
GSVfsCWWLQFRDTEPCSDYCLSHIINLLEDWGPCyEHGqHhIRTPRTPARVTGGVFLVDKNPHNTTESRLVVDFSQFSR
   lp       nak      x       d     h   e y    k                q a              
   sx       h                      n     l                                      
   x                                                                            

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
. ..** *** *************:** *** *******:**************.**  *:**:*. **       *:* 
GtTRVSWPKFAVPNLQSLTNLLSSNLSWLSLDVSAAFYHLPLHPAAMPHLLVGSSGLSRYVARLSStSRI----hDHQHG
 n                                                    c  pg       n       yn    
                                                                          n     
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
* * *:  *  ::* :*:**: * *****:***.*: **** ***: * ***:* ****:  *:**.****:**.  * *
TmQNLHNSCsRNLYVSLLLLFqTlGRKLHLYSHPIILGFRKIPMGVGLSPFLLAQFTSAICSVVRRAFPHCLAFSYMDDL
 l d          yk f           v            x   m x                     v   
                     x x                                                        
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*****   : *:: : ::*:*:*:*::**.:******* * ***: **.:* ***:**  *:   : *:**.** **** 
VLGAKSVQHLESLYTAVTNFLLSVGIHLNTSKTKRWGYtLhFMGYVIGSWGsLPQDHIVhKiKdCFRKLPVNRPIDWKVC
                       l     aa       n n    i     a      iq lxe                
                                      s            t                            
                                                   x                            

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*  ***:.***  .*********:: * :**:***** *** **  ** :****.***.*********** ***:.:***
QRIVGLLGFAAPFTQCGYPALMPLYaCITAKQAFVFSPTYKAFLCkQYMNLYPVARQRPGLCQVFADATPTGWGLAIGHQ
                         t                   q  ih        s                     
                         n                      a                               
                         x                                                      

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
* *..* ******** :*******.***: : ***** **. ***********:***** **.******.*****:****
RMRGTFVAPLPIHTAELLAACFARSRSGAklIGTDNSVVLSRKYTSFPWLLGCAANWILRGTSFVYVPSALNPADDPSRG
 l                           ni          g                                      
                             tv                                                 
                             r                                                  

       810       820       830       840       850
....:....|....:....|....:....|....:....|....:....|
***: ** :   * ****  **:* .* **:  * ****:****  *. *
RLGlYRPLLRLpFQPTTGRTSLYAdSPSVPSHLPdRVHFASPLHVAWRPP
   vf      l r          a       v          t k  
                        v                         
                                                  
© 1998-2020Legal notice