HBVdb::Dataset - Hepatitis B Virus Database

Dataset for protein Pol of genotype D

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
           :                                            .      *: .       .
MPLSYQHFRrLLLLDdE--AGPLEEELPRLADEgLNRRVAEDLNLG-NLNVSIPWTHKVGNFTGLYSSTVPVFNPHW-KT
      r  k v  end           h    d       e     dpt n        s       si i   n
               e                               t                     a






        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  .    .    : .*      *:      :     :      *: :*   **.. *    *            *   *
PSFPNIHLHQDIIKKCEQFVGPLTVNEKRRLQLIMPARFYPnVTKYLPLDKGIKPYYPEHLVNHYFQTRHYLHTLWKAGi
t  k     n  nr  h      i      k         ka                 v d    a     i     v
             e                            f                 i






       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     .     :      .:    *               .   .  : .  . *. .  .   . :* .  :  :
LYKRETThSASFCGSPYSWEQeLQHGA-----------ESFHQQSSGILSRPPVGSSLQSKHrKSRLGLQSQQGHLARRQ
  q  s r       s t   dih                v         gss  p    eysqp   f     pm kc
                     k r                                      q
                                                              c
                                                              h




       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
:
QGRSWSIRAGiHPTaRRPFGVEPSGSGHtTNlAsKSASClyQSPVRKAAYPaVSTFEkHSSSGHAVElHNLPPNSARSQs
   gg l trf  at  svrm  as r nahf nr t gih  sdkttthssd  saryap snt  fnkfsssat   g
    r     v   s             a  r r     f    ige  dtt   v x p        q i   f
          t                    p       s      q            t





       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                .*   .        .   .                  :**   .: .      . *: *
ERPVFPCWWLQFRNSKPCSDYCLShIVNLLEDWGPCaEHGEHHIRIPRTPaRVTGGVFLVDKNPHNTAESRLVVDFSQFS
g -ss       s e    h i l i         t   k    t    s                e
w  -        d                      v                              k
                                    d





       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*        :*:.  : ::.:  *     *  . *.  : .*  * :.  :: . *      *
RGnyRVSWPKFAVPNLQSLTNLLSSNLSWLSLDVSAAFYHlPLHPAAMPHLLVGSSGLSRYVARLSSNS--RIfNh---Q
  dh                     d   i          i     s           pg    v yd     ldy
  kd                                                              tt     v n
  h                                                                      i





       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
      :    :  .     :*  .   *:* **.*:  .: *:.     **:  .  : :  .         : :   *
hGTMqNLHDsCSRNLYVSLLLLYQTFGRKLHLYSHPIILGFRKIPMGVGLSPFLLAQFTSAICSVVRRAFPHCLAFSYMD
r nlpd   y   h     m   k l w   m      m               m      l                i
  i                        q                                                  v






       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
    *             :  *: .: :.:*  **  **  *   *  :   *  .* **   :     : *    :* :
DVVLGAKSVqHLESLFTAVTNFLLSLGIHLNPNKTKRWGYSLhFMGYVIGcYGSLPQdHIiQKIKECFRKLPvNRPIDWK
       tas   a y       m v v    h       h n    s  sh     e  rh ltd      i
         h             f        t                 gw        vl  r
         p                                                  k
         x




       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
:  *.   *   *** *  **.  .        .   :    : *   :     *   :  .:   : :.**.      *
VCQRIVGLLGFAAPFTQCGYPALmPLYACIQSKQAFTFSPTYKAFLCKQYLNLYPVARQRPGLCQVFADATPTGWGLVMG
                       k     thar       p  t  yq  mt        s                ai
                                              r






       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
    ..       **  *  :***.  .  *   . *   ::**. *  ** :*  *:  *.  *:: *    **
HQRMRGTFlAPLPIHTAELLAACFARSRSGANIlGTDNSVVLSRKYTSfPWLLGCAANWILRGTSFVYVPSALNPADDPS
        q                       li              y      t
        s                       v
        p
        r
        v
        m
        x

       810       820       830       840       850
....:....|....:....|....:....|....:....|....:....|....:.
   **  *.       . :*. * *.    *   *.                  .
RGRLGLsRPLLRLPFRPTTGRTSLYADSPSVPSHLPDRVHFASPL--HV--AWRPP
     iy   ic   q          a         v              e k
     pf
     vc
      a