Dataset for nucleotide sequence Genomes of genotype RF
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| 10 20 30 40 50 60 70 80 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * *** * cTCCACaACcTTCCACCAAaCTCTgCaAGAtCCCAGaGTgAGgGgCCTgTAtTTcCCTGCTGGTGGCTCCAGTTCaGGAA t----gcg-a--t--t---g----ttt---c-----g--c--a-ct--a--ccct a c cgg - t ---at - t- - a--g - a a- a a- -- t -- t - - - - g 90 100 110 120 130 140 150 160 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * * * * * * ** ** * * * *** CAGTaAaCCCTGtTCcGAcTACTGcCTCtccCaTaTCGTCAATCTTcTCGAgGAtTGGGGACCCTGcgCcGAACATGGAG t acg g c aa ac t ta aga tcc ta c cagt a c t taat t c c gt a c ga 170 180 190 200 210 220 230 240 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * ** ***** * ** ** ** * * * *** * * * AaCAtcaCATCAGGAtTCCTAGGACCCCTgCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAgAATCCTCACAATACC g cag c c c t ca ta c a t 250 260 270 280 290 300 310 320 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** **** * ** ** * *** * ** ** * ** **** ** gCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAaCaaCCgtGTGTCtTGGCCAAAATTCGCAGTCCC aa g aggttc ac c t t tac g g g a 330 340 350 360 370 380 390 400 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** * ** * ** * * * * ** ** * ** * * ** * * * * * cAACCTCCAATCACTCACCAACCTCcTGTCCTCCAAcTTGTCCTGGtTATCGCTGGATGTGTCTGCGGCGTTTTATCATa a t g tt gt ag tc c t a c a 410 420 430 440 450 460 470 480 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * * * ***** ** ** * * *** * ** * * ** * * TTCCTCTTCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTAtCAAGGTATGTTGCCCGTTTGTCCTCT g a g t gc g g 490 500 510 520 530 540 550 560 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * ** * ** *** ** * * ** AaTTCCAGGAtCaTCaACcACCAGCACgGGACCaTGCAgaACCTGCACgAcTcCTGCTCAAGGaACCTCTATGTaTCCCT gc a ta g t a ctgtc ga c cag ta taa t g a c a t c c a a t ct g g 570 580 590 600 610 620 630 640 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * * ** ** ** * ******* ****** * *** * * ** * * CcTGTTGCTGTACaAAACCTtCGGAcGGAAAtTGCACcTGTATTCCCATCCCATCATCcTGGGCTTTCGcAAaATtCCTA a c t tc at t c t g t g g a t a t 650 660 670 680 690 700 710 720 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** * ** ******** * ** * * * * * * * * ** * ***** TGGGAGTGGGCCTCAGcCCGTTTCTCcTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGTAGGGCTTTCCCCCAC t t t c c c t a 730 740 750 760 770 780 790 800 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** *** ** ** * ** * * * *** ** * ** * TGTtTGGCTTTCAGTTATATGGATGATGTGGTATTGGGGGCCAAGTCTGTACAaCATCTTGAGTCCCTTTtTaCCgCTgT c t c g t c tc g aa g cg c g ag a g t a a 810 820 830 840 850 860 870 880 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * *** * * **** * * * * ** *** * * * TACCAATTTTCTTTTGTCTTTGGGTATACATTTaAACCCTaAcAAAACcAAaaGaTGGGGtTAcTCcCTtaAcTTcATGG c gg c c g ta cc t g a gc t c t tt ac t t a t g a g g c 890 900 910 920 930 940 950 960 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** ** * * ** * ** ** ** * ** GaTATgTaATTGGaaGTTggGGtaCtTTaCCaCAaGAaCAtATtgTACaaAAAaTCAAacAaTGTTTTaGaAAAcTtCCT c ca c gt c at gtgac g g gtct c cagcttc gc t gggtc c cc g t g c t g tg a c c a c ag g t g a g c c g c c g t t a 970 980 990 1000 1010 1020 1030 1040 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * *** * * * * * ** * ** ** * ** ** GTaAAtAGgCCTATTGATTGGAAAGTaTGTCAaaGaATTGTGGGTCTTtTGGGcTTTGCtGCcCCtTTtACaCAATGTGG a tc cc a cg c g g c gc t ctca c cc a t c c t a c g c a c g a g g a c t c g a c 1050 1060 1070 1080 1090 1100 1110 1120 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** ** * ** * * * * ** ** * * ** tTATCCTGCtTTaATGCCtTTaTATGCATGTATaCAAtCtAAgCAGGCTTTcACtTTCTCGCCAACTTACAAGGCCTTTC a c a cc gca c g c t gg cc a a t a t t t aatt ct c c a g c a g g g t g c 1130 1140 1150 1160 1170 1180 1190 1200 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** ** * ** * * * ** * * * * * * TgtGTAAACAaTAtcTGAACCTTTACCCCGTTGCcCGGCAACGGcCaGGTCTgTGCCAAGTGTTTGCTGAcGCAACCCCC aaacc c g cac cc ta t t c t cc t g c t a 1210 1220 1230 1240 1250 1260 1270 1280 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| *** * * * ** **** * ACTGGcTGGGGCTTGGccATaGGCCATCagCGCATGCGTGGAACCTTTgtGgCTCCTCTGCCGATCCATACTGCGGAACT a ttg g c gc c g ca t gt a c t at t c tc a c a 1290 1300 1310 1320 1330 1340 1350 1360 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** * * * ** * * * ** ** * CCTAGCaGCTTGTTTTGCTCGCAGCcGGTCTGGaGCaAAacTtaTCGGgACtGAcAAcTCTGTtGTcCTcTCtCGgAAaT g g c c c ac g g cca cc t a c t t c c t tg c c g t t t gg g t g g g g a g c a a t 1370 1380 1390 1400 1410 1420 1430 1440 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * ** * * * ** * *** * * * * * AcACcTCcTTTCCATGGCTGCTaGGcTGTGCTGCCAACTGGATCCTgCGCGGGACGTCCTTTGTcTACGTCCCGTCGGCG t a g ac c g a t a a a t c at a a t a t a 1450 1460 1470 1480 1490 1500 1510 1520 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** ** * * * * * * * * * CTGAATCCcGCGGACGACCCgTCTCGGGGcCGcTTGGGacTCTacCGTCCcCTTCTtcgtCTGCCGTTCCGgCCGACCAC t t c c t tc gact ct c t c ctac atta at aa ac t a c g t g g g g t tc t a c t c t 1530 1540 1550 1560 1570 1580 1590 1600 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * ** * * ** ** * * * *** GGGGCGCACCTCTCTTTACGCGGtCTCCCCGTCTGTGCCTTCTCATCTGCCGGaCCGTGTGCACTTCGCTTCACCTCTGC a a t g t c g g c 1610 1620 1630 1640 1650 1660 1670 1680 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** ** ** * * * ACGTCGCATGGAgACCACCGTGAACGCCCaCCaggtctTGCCCAAGGTcTTacATAAGAGGACTCTTGGACTcTCaGCaA ta ca g a a tgtataaagc t g cag gt c a tcttatg c gttca a a a gg g gt ccgt a c 1690 1700 1710 1720 1730 1740 1750 1760 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * * * * TGTCAACGACCGACCTTGAGGCATACTTCAAAGACTGTgTgTTTAAaGACTGGGAGGAGTTGGGGGAGGAGAtTAGgTTA a gga g aag g t a cgcg g a acca ca t tccc ac tg t t t t ggg c c 1770 1780 1790 1800 1810 1820 1830 1840 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * * * AaGgTCTTTGTAcTAGGAGGCTGTAGGCATAAATTGGTCTGttCACCAGCACCATGCAACTTTTTCACCTCTGCCTAATC t act a t g g cgt g agagcatgagc t g 1850 1860 1870 1880 1890 1900 1910 1920 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * ** * * * ** ATCTCa---TGTTCATGTCCtACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTgGGGCATGG------------- tc gtt a gg gaa t c a aa atagaacaacttt g a r 1930 1940 1950 1960 1970 1980 1990 2000 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** * * * * * * -----------------------ACATTGACCCgTATAAAGAATTTGGAGCTtCTGTGGAGTTACTCTCtTTTTTGCCTT gccatatggcctttttggcttag c taat aa ctc g g g a g aa a a c c 2010 2020 2030 2040 2050 2060 2070 2080 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * ** * * * * * * * CTGAcTTcTTTCCtTCtaTtCGaGATCTcCTcGAcACCGCCtCtGCTCTgTATCGGGAgGCCTTAGAGTCTCCgGAaCAT ag t t c g ag aa g c t a t t tg a ct a tca a tt tc ag ct t g c c a c c t a t aa c g c a a t g c g g 2090 2100 2110 2120 2130 2140 2150 2160 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** ** ** * * ** * * **** * TGtTCACCTCACCATACaGCACTCAGGCAAGCtATTCTgTGtTGGGGtGAgtTgATGAaTcTgGCcACCTGGGTGGGaag ca gg t t ca a ag ct t c g ac a cct a t t tgt t g t c ag c a c t c c a t a 2170 2180 2190 2200 2210 2220 2230 2240 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * * ** * * * * * TAATTTGGAAGAtCCAGCATCcAGgGAatTAGTAGTCAGcTATGTCAAtgtTAATATGGGCCTAAAaaTcAGaCAAcTaT a ac c c atatc tc a cccga g agat t cac c cg tt g gt t g t cc t tga t t c a g 2250 2260 2270 2280 2290 2300 2310 2320 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| **** * * * * * * * * * ** * TGTGGTTTCACATTTCcTGTCTtACTTTTGGaAGAGAAACtGTtcTtGAgTATTTGGTGTCTTTtGGAGTGTGGATTCGC a tgc t c c tg g a c t c ca a a c a c c c a c c g at g c a g a gg 2330 2340 2350 2360 2370 2380 2390 2400 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** * ** * ** **** *** * * * * ACTCCTcCcGCtTAcAGACCACCAAATGCCCCTATCtTATCAACACTTCCGGAaACTACTGTTGTTAGACGAc------G caaac a t tat c g tg a a agggacc- tt c c - a 2410 2420 2430 2440 2450 2460 2470 2480 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * * * * * * * ** AGGCAGGTCCCCTAGAAGAAGAACTCCCTCGCCTCGCAGACGAAGgTCTCAATCGCCGCGTCGCAGAAGATCTCAATCTC t a c c a c a a c gc a 2490 2500 2510 2520 2530 2540 2550 2560 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** * * * * * ** * * ** GGGAATCtCAATGTTAGTATtCCTTGGACTCATAAGGTGGGAAAcTTTACtGGGCTTTATTCTTCTACtGTACCTgTCTT ca ctc c a c c a c g t g t g c cg ct gacc tg g a g g c a a t a c 2570 2580 2590 2600 2610 2620 2630 2640 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * ** ** * * * ** * * TAAtCCTgAgTGGcAAACtCCcTCtTTTCCTcAcATtCATTTaCAggAgGAcATTaTtaAtAgaTGTcAACAaTtTGTgG c ct gc t a ta ta c aa t a c gagcc aa t cg cgca ag cg g g ac a a a c a cg a t c ac c a c g g a 2650 2660 2670 2680 2690 2700 2710 2720 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** * ** * * * * ***** * * ** * ** * ** GcCCtCTtACAGTtAATGAaAAaAGgAGatTaaAATTaATTATGCCTGCTAGGTTcTATCCtAAccTTACcAAATATTTg g at c ta c c g cc ac gc gc cc gg c c c a t tc a ctgcc t g c a t c g a g g a a c gtg a a g g aaa 2730 2740 2750 2760 2770 2780 2790 2800 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * ** * ** * * ** ** * *** ** * * *** * * CCcTTgGAcAAaGGcATtAAACCtTATTATCCtGAacATgcAGTTAATCATTACTTCcAaACtAGgCAtTATTTACAtAC ac a t g t c g c a gt cct ta gg cc a c g c t g a c ta ga g a c g 2810 2820 2830 2840 2850 2860 2870 2880 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * * * ** * * * * ** * * ** * TCTgTGGAAgGCtGGcATtcTATATAAGAGAGAAaCtACACgcAGCGCCTCATTTTGTGGGTCACCATATTCTTGGGAAC ct a c at g tg at a g tgt at c at t t c ac t a t a g c c t a a 2890 2900 2910 2920 2930 2940 2950 2960 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * * * * AAGAgCTACAGCATgggaggttggtcttccaaacctcgacaaggcatGGGGacgAATCTTTCtgttccCAATCCtCTGGG a ta gt ---------------------------------- acaa c ag caccaga c c gct cctagaa agtc tga gt g c a g g c cg c 2970 2980 2990 3000 3010 3020 3030 3040 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** ** * * * * * * * ** **** * ATTCTTTCCCGAtCAcCAGTTGGAcCCtGCgTTCggAGCcAACtCaaacAATCCAGATTGGGACtTCAAcCCcaACAAGG tc c gc t t a c aa a ta cgca c c tc t gcta g a g a a t 3050 3060 3070 3080 3090 3100 3110 3120 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * ** * ** * * * ** AtcacTGGCCaGAgGCaAAtcAGGTaGGAGcgGGAGCATTCGGGCcaGGgTTCACcCCaCCaCAcGGcGGtCTtTTGGGG cact gccc cc ca g g tt t c at a tg tc t t g t aaacg gc a a a g a c c g a t g t 3130 3140 3150 3160 3170 3180 3190 3200 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * TGGAGCCCTCAGGCTCAGGGCATAtTgacAACagTGCCAGcAg---------------------ctCCtCCTCCTGCCTC g at c a ccgc acacgatt a at a aa g ag a a c c c tg a t t g 3210 3220 3230 3240 3250 3260 3270 3280 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** ** ** * ** * * * cACCAATCGgCAGTCAGGAAGaCAGCCTACtCCcaTcTCTCCACCTcTaAGAgACAgTCATCCTCAGGCCATGCAGTGGA tg c atg gc ga a c c gc ga a at gc gac cc c a gca a a t g a at a g g g t . A c |
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