Dataset for nucleotide sequence Genomes of genotype RF
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| 10 20 30 40 50 60 70 80 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * * * ** *** * * cTCCACaACcTTCCACCAAaCTCTgCAAGATCCCAGaGTgAGaGgcCTgTAtTTcCCTGCTGGTGGCTCCAGTTCAGGAA t t gcgat t tt g t tg c a g c ag ct a cc t a c ag a t a a g a a t g 90 100 110 120 130 140 150 160 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** * * * * ** ** ** * ** * *** CAGTaAaCCCTGtTCcGAcTACTGcCTCTccCATATCGTCAATCTTcTCGAgGAtTGGGGACCCTGcgCcGAACATGGAG t ccg g c aa ac t ta aga tcc ta c cagt a c g t taat t c tt c a a 170 180 190 200 210 220 230 240 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * **** * *** ***** ** * * *** ** ** *** * * * * AACATCaCATCAGGAtTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAgAATCCTCACAATACC g cag c a t c c a tt 250 260 270 280 290 300 310 320 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * *** * ** ** ** * ***** ***** ** ** *** *** gCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAaCtaCCGtGTGTCtTGGCCAAAATTCGCAGTCCC aa t g aggtac ac c t tac g g 330 340 350 360 370 380 390 400 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * ** **** * ** * *** *** *** *** **** * * ***** * * * * cAAcCTCCAaTCACTCACCAACCTccTGTCCTCCAAcTTGTCCTGGTTATCGCTGGATGTGTCTGCGGCGTTTTATCATa a t g t gt g t c t a c 410 420 430 440 450 460 470 480 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| *** * ** * ******* ** *** * ** *** * * *** * ** * ** * TTCCTCTtCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTATCAAGGTATGTTGCCCGTTTGTCCTCT g a g t c c g g 490 500 510 520 530 540 550 560 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * * ** * *** **** ** *** * *** AaTTCCAGGATCtTCAACcACCAGCACgGGACCcTGCAgaACCTGCACgACTCCTGCTCAAGGAACCTCTATGTaTCCCT cc a aa g a a t c t a cag a t a g aac a t t g c t a a g g 570 580 590 600 610 620 630 640 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** ** *** *** ** * ** ** * ******* ****** * * **** *** * ** *** CcTGTTGCTGTACAAAACCTtCGGAcGGAAAtTGCACCTGTATTCCCATCCCATCATCcTGGGCTTTCGgAAAATtCCTA a t c at t c t g t c g a t a 650 660 670 680 690 700 710 720 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** * *** * ** ** ***** * ** ***** * * * * *** * * ** * * ***** * TGGGAGTGGGCCTCAGcCCGTTTCTCtTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGTAGGGCTTTCCCCCAC t c c c c 730 740 750 760 770 780 790 800 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * *** ** *** * ** ** * * *** * * ** * ** *** * ** TGTtTGGCTTTCAGTTATATGGATGATGTGGTaTTGGGGGCCAAGTCTGTACAgCATCTTGAGTCCCTTTtTaCCGCTGT c t c a tc g aa gtca c g ag a g t a c 810 820 830 840 850 860 870 880 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| **** * *** **** ** * * * ** **** * * * * * TACCAATTTTCTTTTGTCTTTGGGTATACATTTaAACCCTaAcAAAACaAAaaGaTGGGGcTAtTCcCTtaAcTTcATGG c c c g ta cc t c gc t t c tt ac t t t g a g c 890 900 910 920 930 940 950 960 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** ** ** ** ** ** ** * * * ** * * ** GaTATgTaATTGGaaGTTggGGtaCtTTgCCaCAggaaCAtATtgTACaaAAAATCAAacaaTGTTTtaGaAAAcTgCCT c ca c gt c at at ac a g atct c caggttc gc t ggtt cc g t t t t cg c c c a c gg acg c g t g g t t c a 970 980 990 1000 1010 1020 1030 1040 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * **** * * ** * * * * ** ** * ** ** ** * ** ** GTaAAcAGgCCTaTTGATTGGAAAGTaTGTCAAcGAATTGTGGGTCTTtTGGGcTTTGCtGCcCCTTTtACaCAATGTGG a tc tc a cg g c c ga t a c gc a t c c t c c g c a g g a g a a t c a c 1050 1060 1070 1080 1090 1100 1110 1120 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** * ** ** * * ** ** ** ** * * aTATCCTGCtTTaATGCCtTTaTATGCATGTATaCAAtCcAAgCAGGCTTTcACtTTCTCGCCAACTTAcAAGGCCTTTC t c a cc gca c g c t gg tc a ta t a t a t t aa c c a g c a c g g 1130 1140 1150 1160 1170 1180 1190 1200 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** ** * ** * ** * * * * ** * * * **** * TgtGTAAACAaTAtCTGAACCTTTACCCCGTTGCcCGGCAACGGcCaGGTCTgTGCCAAGTGTTTGCTGAcGCAACCCCC aaacc c g ca cc ta t t c t cc t c a t 1210 1220 1230 1240 1250 1260 1270 1280 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * *** * * ** * ** * *** * * ACTGGcTGGGGCTTGGcCATaGGCCATCaGCGCATGCGTGGAACCTTTgtGgCTCCTCTGCCGATCCATACtGCGGAACT a tt g gc c c cca t g a c g t a t ac a c t 1290 1300 1310 1320 1330 1340 1350 1360 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** * * * * * ** * ** * ** ** * ** ** * CCTAGCcGCTTGTTTTGCTCGCAGCcGGTCTGGaGCaAAacTcaTCGGgACtGAcAAcTCTGTtGTcCTctCcCGcAAaT g a c c a t g gccca tc t t c t t c c t tg t g g t t gg a a g g g a g a g c a t 1370 1380 1390 1400 1410 1420 1430 1440 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * * ** *** * * ** * * ** ** ** * ** *** *** * AtACaTCcTTTCCATGGCTGCTAGGcTGTGCTGCCAACTGGATCCTGCGCGGGACGTCCTTTGTtTACGTCCCGTCGGCG c c g ac c g a t t a a c c at a a a t t 1450 1460 1470 1480 1490 1500 1510 1520 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** ** * * ** * * * * * * CTGAATCCcGCGGACGACCCgTCtCGGGGCCGcTTGGGaCTCTacCGtCCcCTTCTtcgtCTGCCGTtCCGgCCGACCAC t t c a t tc tact ct c g c ctact att at aa ac t a c g g g g t g g t tc t a t c t 1530 1540 1550 1560 1570 1580 1590 1600 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * * ** * * * * ** * **** ** * * ** * ** * * GGGGCGCACCTCTCTTTACGCGGtCTCCCCGTCTGTGCCTTCTCATCTGCCGGaCCGTGTGCACTTCGCTTCACCTCTGC a a t t gc c t c c g 1610 1620 1630 1640 1650 1660 1670 1680 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** ** ** ** * * * ACGTCGCATGGAgACCACCGTGAACGCCCa---------CCaggtct---------TGCCCAAGGTcTTACATAAGAGGA ta ca g a a tg tagaaagc a t c cag gt c c gtttga a g cct 1690 1700 1710 1720 1730 1740 1750 1760 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** * * ** * * * * * * ** ** CTCTTGGACTcTCaGCAATGTCAACGACCGACCTTGAGGCATACTTCAAAGACTGTgTGTTTAaaGAcTGGGAGGAGTTG a tcttatg a ggg g aat g t a gct g a acca gg t g t g t c 1770 1780 1790 1800 1810 1820 1830 1840 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** *** * GGGGAGGAGAtTAGgTTAAaGgTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTcTGttCACCAGCACCATGCAACTT ca t gccc a t act t g g cgt t c g g t 1850 1860 1870 1880 1890 1900 1910 1920 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * * * ** * *** * * **** * ** * * * **** * * * * TTTCACCTCTGCCTAATCATCTCaTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTgGGgCAT gg tt a t c a aa 1930 1940 1950 1960 1970 1980 1990 2000 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** ** * ** ** ** * ** * GG------------------------------------ACATTGACCCgTATAAAGAATTTGGAGCTtCTGTGGAGTTAC atag a aactttgccatatggcctttttggcttag c ta t a ctc g a c 2010 2020 2030 2040 2050 2060 2070 2080 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * *** ** * * * * * * ** * ** * * * TCTCtTTTTTGCCTTCTGACTTCTTTCCTTCtaTtCGaGATCTcCTcGAcACCGCCtCtGCTCTGTATCGGGAgGCCTTA g a ga t t ac gg ag aa g c ta a t tg a gt a tca a tt tc a a c c c a t a g c c a a g g t 2090 2100 2110 2120 2130 2140 2150 2160 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * ** * * * ** *** * * GAGTCTCCgGAaCATTGTTCACCTCACCATACaGCACTCAGGCAAGCtATTCTgTGtTGGGGtGAgtTgATGAaTcTgGC a ct t g c ca tg t c t ta a aag ct t c tg ac a tc t a g g c g a a c c 2170 2180 2190 2200 2210 2220 2230 2240 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| **** *** * * * * * * * * * * * ** * cACCTGGGTGGGaagTAATTTgGAAGAcCCAGCATCcAGGGAatTAGTAGTCAGcTATGTCAAtgtTAATATGGGCCTAA t tgta ac c t agattg t a ccaga g agat t cac c cg tt c c c t c t a 2250 2260 2270 2280 2290 2300 2310 2320 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * *** ** * * * * * * ** * * * AaaTcAGaCAAcTATTGTGGTTTCACATTTCcTGTCTtACTTTTGGaAGAGAAACtGTtcTtGAgTATTTGGTGTCTTTt gt t g t cc t c t c c g g c t tg ca a a c c c c a g a c c c at a g a g 2330 2340 2350 2360 2370 2380 2390 2400 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * *** **** * * * * * ** **** * ** **** *** * * * GGAGTGTGGATTCGCACTCCTcCcGCtTAcAGACCACCAAATGCCCCTATCTTATCAACACTTCCGGAaACTACTGTTGT catac a t gat c c g tg a at c t 2410 2420 2430 2440 2450 2460 2470 2480 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** * * ** * *** ** *** ** * TAGACGAc------GAGGCAGGTCCCCTAGAAGAaGAACTCCCTCGCCTCGCAGACGAAGgTCTCAATCGCCGCGTCGCA a agggacc- t a c a c a a c - 2490 2500 2510 2520 2530 2540 2550 2560 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * *** * *** * ** * * ** ***** * * * ** * ** GAAGATCTCAATCTCGGGAATCTCAATGTTAGTATtCCTTGGACtCATAAGGTGGGAAAcTTTACtGGGCTTTATTCTTC a ac aca gtc c a c a c g t c g c c c cg c g a g 2570 2580 2590 2600 2610 2620 2630 2640 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * * *** * * * ** * * * * * TACtGTACCTgtCTTTAAtCCTgAgTGGcAAACtCCcTCtTTTCCTcAcATtCATTTaCAggAgGAcATTaTtaAtAgAT t gact tgt c ct c t at ta t c aa t a c ga cc aa t cg cgca ag a c aa a a t c a g g a gc a c c c g a t 2650 2660 2670 2680 2690 2700 2710 2720 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** ** * * * * ** * * * * ***** * * * * ** GTcAaCAaTtTGTaGGcCCtCTtACAGTtAATGAaAAaAGgAGatTaAAATTaATTATGCCTGCTAGgTTcTATCCtAAc g g g ac g g c c taaa c gttcc a gc gc g gg c c c a t tc c ct a a g a c c cg a a a g t a a 2730 2740 2750 2760 2770 2780 2790 2800 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** ** ** * * ** * ** ** ** ** ** * ***** ** * cTTACcAAATATTTGCCcTTgGAcAAaGGcATtAAACCgTATTATCCtGAacATgcAGTTAATCATTACTTCcAaACtAG ggc t c a tc a t g t c t c a gt cctg t ta g cc tc a t a g g c c ta ga g aa a a g a 2810 2820 2830 2840 2850 2860 2870 2880 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** * * * * *** * * * * ** * * * * * ** * aCAtTATTTACAtACTCTgTGGAAgGCtGGcATtcTATATAAgAGAGAaaCtACACgcAGCGCCTCATTTTGtGGGTCAC g c g c ct a at g tg ct a g tgt at c at t t c t a g a c t a a g 2890 2900 2910 2920 2930 2940 2950 2960 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** **** * * ** * CATATTCTTGGGAACAAGAgCTACAGCATgggaggttggtcttccaaacctcgacaaggcatGGGGacgAATCTTTCtgt t a c a t t --------------------------------- acaa c ac cac gct cct gga agtc tcaggt g g ta g g c 2970 2980 2990 3000 3010 3020 3030 3040 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * * * * ** ** ** ** * * * * * ** **** tccCAATCCtCTGGGATTCTTtCCCGAtCAcCAGTTGGAcCCtGCgTTCggAGCcAActCaaacAATCCAGATTGGGACt cag c c tc c a gc t t a a aa a ta cgca c c a a g c g t 3050 3060 3070 3080 3090 3100 3110 3120 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * * * * * * * ** * * ** * TCAAcCCcaACAAGGAtcacTGGCCaGAgGCaAAccAGGTaGGAGcgGGAGCATTCGGGCcaGGgTTCACcCCaCCaCAc t gcta a cact gccc cc ta g tt t c at a tg tc tt t g t a a a a a a g c t c t 3130 3140 3150 3160 3170 3180 3190 3200 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * ** * * * * GGcGGtCTtTTGGGGTGGAGCCCTCAGGCTCAGGGCATAtTgacAACagTGCCAGCAgcaCCtCCTCCTGCCTCcACCAA aaacg gc g a a a tccgc acacgatt at aat g t tg g at g ta c tt c tg a a a g 3210 3220 3230 3240 3250 3260 3270 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....: * * * ** * ** * ** ** ** **** TCGgCAGTCAGGAAGaCAGCCTACtCCcaTcTCTCCACCTcTaAGagACAgTCATCCTCAGGCCATGCAGTGGAA c g gtc gc ga a a c gc ga at gc gac cc a a g aa t a c at a tg t |
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