HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence PreC of genotype D

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
        *                    *          *                   *       *   **     *
ATGCAACTTTTTCACCTCTGCCTA---ATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTG
             c                    ta           c   t



        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
* *          *             *         ** *            *  * *  **    *
GCTTTgGGgCATGGACATtGAtCCTTATAAAGAATTTGGAGCTaCTGTGGAGTTACTCTCGTTTTTGCCTtCTGACTTCT
     a  a         c  ct g                  t c   c          t         gac  t  t
                        a                                   a         at
                                                                      c

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                       *                            *      *
TTCCTTCaGTACGAGATCTTCTaGATACCGCCTCAGCTCTgTATCGGGAaGCCTTAGAGTCTCCTGAGCATTGtTCACCT
a   g  ca g  t     g  t  c  t  tg    gt a t   a  t  a     a   t    a     ca tga
       g  t  g                  a       c        c  t                       g
       t

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *         *    *           *    *                      * * **  *     **  *
CAcCATACTGCACTCAGGCAAGCAATtCTtTGCTGGGGGGAacTAATGACTCTAGCtACCTGGGTGGGTGgTAATTTGGA
  t     g  ta          tt c  g  t     a  ct t  atact gt c           aata     ac
        c              cg a  a        t  g                          c cg
        a                                t

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                   *             *   *                         *
AGATCCAacATCcAGgGACCTAGTAGTCAGTTATGTcAACACTAATATGGGCCTAAAGTTCAGGCAACTaTTGTGGTTTC
c  c a gtg  t  a  tta   t  tgcc     t  ttaacccg a c t t  a  tc a   t c  a
t                 a     g    a                        g              t
                                                                     g

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
      *          ** *                                *   *  ***   *     * **
ACATTTCTTGTCTCACTTTTGGAAGAGAAACgGTcaTAGAGTATTTGGTGTCTTTCGGAGTGTGGATTCGCACTCCTCCA
  gc      c  t tg     g   c tgta  tt g  a              t                    a ac
  c          a  c           c  c   c    t                                     tg
                               t   g

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
         **     ** * *  * *    *     ***  *         *   ** *                **
GCTTATAGACCACCaAATGCCCCTATCtTATCAACACTTCCGGAGACTACTGTTgTTAGACGACGAG------GCAGGTC
c a         aat            c       g        a t tg    a     ga a  t           a
            g                                   g                             c
            t

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                   * **                      *    *     *   *  *        *
CCCT---AGAAGAAGAACTCCCTCGCCTCGCAGACGAAGgTCTCAATCGCCGCGTCGCAGAAGATCTCAATCTCGGG---
          g             a              a   a              c     a  a



       650
....:....|....

AAtCTCAATGTTAG
gcc c --------
       c     a