HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence PreC of genotype D

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
        *                    *             *         *         *       *   **
ATGCAACTTTTTCACCTCTGCCTA---ATCATC---TCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGG
             c                       ta           c   t



        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  ** *   **     *             *         ** *            *  * *  **    *
GTGGCTTTgGGgCATGGACATTGAtCCTTATAAAGAATTTGGAGCTaCTGTGGAGTTACTCTCGTTTTTGCCTtCTGACT
        a  a         c  ct g                  t c   c          t         gac  t
                           a                                   a         a
                                                                         c

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                          *                            *      *
TCTTTCCTTCaGTACGAGATCTTCTaGATACCGCCTCAGCTCTgTATCGGGAaGCCTTAGAGTCTCCTGAGCATTGtTCA
t a   g  ca g  t     g  t  c  t  tg    gt a t   a  t  a     a   t    a     ca t
          g  t  g                  a       c        c  t                       g
          t

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
      *         *    *           *    *                      * * **  *     **  *
CCTCAcCATACTGCACTCAGGCAAGCAATtCTtTGCTGGGGGGAacTAATGACTCTAGCcACCTGGGTGGGTGgTAATTT
ga   t     g  ta          tt ct g  t     a  ct t  atact gt t           aata
           c              cg a  a        t  g                          c c
           a                                t

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                      *             *   *
GGAAGATCCAacATCcAGgGACCTAGTAGTCAGTTATGTcAACACTAATATGGGCCTAAAGTTCAGGCAACTaTTGTGGT
ac c  c a gtg  t  a  tta   t  tgcc     t  ttaacccg a c t g  a  tc a   t c  a
   t                 a     g    a                        t              t
                                                                        g

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  *      *          ** *                                *   *  ***   *     * **
TTCACATTTCTTGTCTCACTTTTGGAAGAGAAACgGTcaTAGAGTATTTGGTGTCTTTCGGAGTGTGGATTCGCACTCCT
     gc      c  t tg     g   c tgta  tt g  a              t                    a
                a  c           c  c   c t  t
                                  t   g

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
            **     ** * *  * *    *     ***  *         *   ** *                *
CCAGCTTATAGACCACCaAATGCCCCTATCtTATCAACACTTCCGGAGACTACTGTTGTTAGACGACGAG------GCAG
acc           aat            c       g        a t tg    a     ga a  t
tg            t                                   g
               g

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*           *  *      * **                      *    *     *   *  *        *
GTCCCCT---AGAAGAAGAACTCCCTCGCCTCGCAGACGAAGgTCTCAATCGCCGCGTCGCAGAAGATCTCAATCTCGGG
a           g             a              a   a                  a a  a
c


       650
....:....|....:..

---AATCTCAATGTTAG
   gcc c --------
          c     a