HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence PreC of genotype D

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                    *
ATGCAACTTTTTCACCTCTGCCTAATC---ATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTG
  t         g          g       c  ta           c   t



        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*            *                       **              *    *  **
GCTTTgGGgCATGGACATtGAtCCTTATAAAGAATTTGGAGCTaCTGTGGAGTTACTCTCGTTTTTGCCTtCTGACTTCT
     a  a       c c  ct g                  t c   c          a         gac  t  t
                        a                                   t         atg
                                                                      c

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                       *                            *      *
TTCCTTCaGTACGAGATCTTCTaGATACCGCCTCAGCTCTgTATCGGGAaGCCTTAGAGTCTCCTGAGCATTGtTCACCT
a   g  ca t  t  c  g  t  c  t  tg    gt a t   a  t  a     a   t    a   gtca tga
       g     g                  a       c        c  t                       g
       t                                            g

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*           *                *    *                      * * **  *      *
CAcCATACTGCACTCAGGCAAGCAATtCTtTGCTGGGGGGAacTAATGACTCTAGCtACCTGGGTGGGTGgTAATTTGGA
  t     g  ta          tg ct g  t     a  ct t  ata t gt c  t        aata     ac
        c              ct a  a           g                          c cc
                             c           t                             g

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                 *                             *
AGATCCAacATCcAGgGACCTAGTAGTCAGTTATGTcAACACTAATATGGGCCTAAAGTTCAGGCAACTaTTGTGGTTTC
c  c a gtg  t  a  t a   t  tgcc     t  tta cccg a c t g  a  tc a   t c  a
t                 a     g    a                        t            a t
                                                                     g

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                 ** *                                *   *  ***   *     * **
ACATTTCTTGTCTCACTTTTGGAAGAGAAACgGTcaTAGAGTATTTGGTGTCTTTCGGAGTGTGGATTCGCACTCCTCCA
  gc      c  t tg     g   c tgta  tt g  a           c  t                    a ac
  c          a  c           c  c   c                                           g
                               t   g

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
         **      * * *  *             **            *   ** *
GCTTATAGACCACCaAATGCCCCTATCtTATCAACACTTCCGGAGACTACTGTTgTTAGACGACGAG------GCAGGTC
c c        ttat            c       g        a t tg    a     gaca  t           a
            a                                   g           tc    c           c
            g

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                   * *                            *         *  *        *
CCCTAGAAG---AAGAACTCCCTCGCCTCGCAGACGAAGgTCTCAATCGCCGCGTCGCAGAAGATCTCAATCTCGGGAA-
       g                a              a   a              c     a  a     a   gc



       650
....:....|....

--tCTCAATGTTAG
  c c --------
       c     a