HBVdb

Dataset for protein Pol of genotype all

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
MPLSYQHFRkLLLLDd--E---AGPLEEELPRLADEgLNRRVAEDLNL--G-n-lNVSIPWTHKVGNFTGLYSSTVPvFN
     p   riv  eegtdt e     d   h   ad  h          q l p  n                si c  
               ne                                   d                      a i  
                                                    t                        n  
                                                                             t  
                                                                             a  
                                                                             s  
                                                                                
                                                                                

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
PeWq-TPSFPdIHLqeDIinrCqQfVGPLTVNEkRRLkLIMPARFYPnvTKYLPLDKGIKPYYPehvVNHYFqTRHYLHT
sh k      h   hqnlvdk e y     i  n   q v  s  f kl   f me        dya d   ka      
 k l      n   k   ak  k       k  l   n         ts                ql             
 d        k   r    h             t             ih                ni             
 n        r        s                            f                 t             
 q                 t                            r                               
                                                g                               
                                                i                               
                                                a                               

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
LWKAGILYKREtTrSASFCGSPYSWEQeLqhg-rlvfqtst--rH----------G-deSFcsQssGILsRspVGpciqS
     v     s h    f        d h-- -------k  -m            akplhpkpp  fp psa ssvrg
                           k  q  afsikgp-  g             e  vrq  t  pa      gl  
                                 stflddkq                t   gh  a           f  
                                  s  n  s                     a                 
                                        e                     t                 
                                                                                
                                                                                
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
qlkqSRLGlQpqQGslArgqqGr-SgsIRArvHpttrr----sfGVEPSGSGhidnsas--------sssSCLhQSaVRK
khrk    p sa rqmdgrks g  wilwsgi sspwg    pv   sastrpthhcvn        kta  iy  pg e
 fq     s qh  p  sstp    rrf twa tpa q    ts    t   catylt         nat  fr  sd t
  s        t  h  tcpa        p f  as w    y         rnnii          r            
           k     nll                      c          skkf                       
                 c                                   vg r                       
                                                      y g                       
                                                      a                         
                                                                                

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
aAYshlSTskr--qSSSGHAVElhniPPs-SarsQSegpvfs-CWWLQFRNSkPCSdYCLsHiVNLlEDWGPCtEhGEHh
ttnpli  feg  ht tsrtm fqhfssn psgpegqrsilp     k  dte   eh  tlli  id     a y k n
k h av    k  kp a n    ncl  g  v  k k--lp         s q   k   c     r      d   q r
e   sh        a        ysv     t    a  -s                   f            y   r s
    nf                  p           -   -                                v     l
    pn                                                                          
                                                                                
                                                                                
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
IRiPRTPARVTGGVFLVDKNPHNTtESRLVVDFSQFSRGstrVSWPKFAVPNLQSLTNLLSSNLSWLSLDVSAAFYHlPL
  t    s                a              nyh                    d   i          i  
                                       is                                       
                                       th                                       
                                       d                                        
                                                                                
                                                                                
                                                                                
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
              *                                                                 
HPA-AMPHLLvGSSGLsRYVARLSSn--SR--ii-Nh----Q---hgTmQnLHdSCSRnLYVSLlLLYkTfGrKLHLYSH
          i  c  pg       t      nf dy    k   yralpd  ny   q f   m  fq y w       
                         h       n  n        r       et   h           l q       
                         d       l  d                s                          
                                 h                                              
                                 y                                              
                                                                                
                                                                                
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
.                                                                               
PIILGFRKIPMGVGLSPFLLAQFTSAICSVVRRAFPHCLAFSYMDDVVLGAKSVQHLESLftavTNFLLSLGIHLNPnKT
  vm               m                       i  l     t   r a yasi h    v     th  
                                           v  m                              s  
                                                                             t  
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   .                                                                            
KRWGYSLnFMGYvIGswGtLPQeHIvqKiKqCFRKLPvNRPIDWKVCQRIVGLLGFAAPFTQCGYPALMPLYACIQaKQA
     t h    i  cy s   d  il l m      i   v                          k   t  tsr  
     n         g         rh   e      t                              l      ht   
                         km   h                                                 
                              d                                                 
                              l                                                 
                                                                                
                                                                                
                                                                                

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
FTFSPTYKAFLckQYlNLYPVARQRpGLCQVFADATPTGWGLaiGHqRMRGTFvaPLPIHTAELLAACFARSRSGAkliG
 v      t  sq  mh        s                vma r l    ls                     nil 
           rn   t        a                 l    i    q                      t   
           nt                                        s                          
                                                     p                          
                                                     r                          
                                                     m                          
                                                                                
                                                                                

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
TDNSVVLSRKYTSFPWLLGCaANWILRGTSFVYVPSALNPADDPSRGRLGLyRPLLrLpfrPTTGRTSLYAvSPSVPSHL
             y      t                             is    h lyq s        d      r 
                                                  vc    c v            a        
                                                   f                            
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                

       890       900 
....:....|....:....|.
                     
PdRVHFASPL-H-VA--WrPP
 v                k  
 g                   
 a                   
                     
                     
                     
                     
                     
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