HBVdb::Dataset - Hepatitis B Virus Database

Dataset for protein Pol of genotype all

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

MPLSYQHFRkLLLLD--d--E---AGPLEEELPRLADEgLNRRVAEDLNL--G-n-lNVSIPWTHKVGNFTGLYSSTVPv
     p   riv  e  egtdt e     d   h   ad  h          q l p  n                si c
                 ne                                   d                      a i
                                                                               n
                                                                               t
                                                                               a
                                                                               s



        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

FNPeWq-TPSFPdIHLqeDIinrCqQfVGPLTVNEkRRLkLIMPARFYPnvTKYLPLDKGIKPYYPehvVNHYFqTRHYL
  sh k      h   hqnlvdk e y     i  n   q v  s  f kl   f me        dya d   ka
   d l      n   k   ak  k       k  l   n         ts                ql
   k        k   r    h             t             ih                ni
   n        r        s                            f                 t
   q                 t                            r
                                                  g
                                                  i
                                                  a

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

HTLWKAGILYKREtTrSASFCGSPYSWEQeLqhg-rlvfqtst--rH----------G-deSFcsQssGILsRspVGpci
       v     s h    f        d h-- -------k  -m            akplhpkpp  fp psa ssv
                             k  q  aflikgp-  g             e  vrq  t  pa      gl
                                   stslddkq                t   gh  a           f
                                    sf n  s                     a
                                          e                     t




       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

qSqlkqSRLGlQpqQGslArgqqGr-SgsIRArvHpttrr----sfGVEPSGSGhidnsas--------ss-sSCLhQSa
rgkhrk    p sa rqmdgrks g  wilwsgi sspwg    pv   sastrpthhcvn        kt a  iy  p
   fq     s qh  p  sstp    rrf twa tpa q    ts    t   catylt         na t  fr  s
    s        t  h  tcpa        p f   s w    y         rnnii          r
             k     nll                      c          sk f
                   c                        l          vg r
                                                        y g
                                                        a


       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

VRKaAYshlSTskr--qSSSGHAVElhniPPs-SarsQSegpvfsCWWLQFRNSkPCSdYCLsHiVNLlEDWGPCtEhGE
g ettnpli  feg  ht tsrtm fqhlssn psgpegqrsilp    k  dte   eh  tlli  id     a y k
d tk h av    k  ka a n    ncf  g  v  k k--lp        s q   k   c     r      d   q
   e   sh        p        ysv     t    -  -s                  f            y   r
       nf                  p           a   -                               v
       pn
       t



       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

HhIRiPRTPARVTGGVFLVDKNPHNTtESRLVVDFSQFSRGstrVSWPKFAVPNLQSLTNLLSSNLSWLSLDVSAAFYHl
n  t    s                a              nyh                    d   i          i
r                                       is
s                                       th
l                                       d





       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                *
PLHPA-AMPHLLvGSSGLsRYVARLSSn--SR--ii-Nh----Q---hgTmQnLHdSCSRnLYVSLlLLYkTfGrKLHLY
            i  c  pg    v  t      nf dy    k   yralpd  ny   q f   m  fq y w
                           h       n  n        r       e    h           l q
                           d       l  d                s
                                   h
                                   y




       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  .
SHPIILGFRKIPMGVGLSPFLLAQFTSAICSVVRRAFPHCLAFSYMDDVVLGAKSVQHLESLftavTNFLLSLGIHLNPn
    vm               m                       i  l     t   r a yasi h    v     th
                                             v  m                              s
                                                                               t






       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

KTKRWGYSLnFMGYvIGswGtLPQeHIvqKiKqCFRKLPvNRPIDWKVCQRIVGLLGFAAPFTQCGYPALMPLYACIQaK
       t h    i  cy s   d  il l e      i   v                          k   t  tsr
       n         g         rh   m      t                              l      ht
                           km   h
                                d
                                l




       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

QAFTFSPTYKAFLckQYlNLYPVARQRpGLCQVFADATPTGWGLaiGHqRMRGTFvaPLPIHTAELLAACFARSRSGAkl
   v      t  sq  mh        s                vma r l    ls                     ni
             rn   t        a                 l    i    q                      t
             nt                                        s
                                                       p
                                                       r
                                                       m



       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

iGTDNSVVLSRKYTSFPWLLGCaANWILRGTSFVYVPSALNPADDPSRGRLGLyRPLLrLpfrPTTGRTSLYAvSPSVPS
l              y      t                             is    h lyq s        d
                                                    vc    c v            a
                                                     f






       890       900
....:....|....:....|..

HLPdRVHFASPL-HVA--WrPP
r  v               k
   g
   a