HBVdb::Dataset - Hepatitis B Virus Database

Dataset for protein Pol of genotype all

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

MPLSYQHFRkLLLLD--d---E--AGPLEEELPRLADEgLNRRVAEDLNL--G-n-lNVSIPWTHKVGNFTGLYSSTVPv
     p   riv  e  egt d       d   h   ad  h          q l p  n                si c
                 ne                                   d                      a i
                                                                               n
                                                                               t
                                                                               a
                                                                               s


        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

FNPeWq-TPSFPhIHLqeDIinrCqQfVGPLTVNEkRRLkLIMPARFYPnvTKYLPLDKGIKPYYPehvVNHYFqTRHYL
  sh k      d   hqnlvdk e y     i  n   q v  s  f kl   f me        dya d   ka
   d l      n   k   ak  k       k  l   n         ts                ql
   k        k        h             t             ih                ni
   n        r        s                            f                 t
   q                 t                            r
                                                  g
                                                  a

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

HTLWKAGILYKREtTrSASFCGSPYSWEQeLqhg-rlvfqtst--rH----------G-deSFcsQssGILsRspVGpci
       v     s h    f        d h-- -------k  -m            akplhp pp  fp psa ssv
                             k     aflikgp-  g             e  vrq  t  pa      gl
                                   stslddkq                t   gh  a           f
                                    sf n  s                     a
                                          e                     t



       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

qSqlkqSRLGlQpqQGslArgqqGr-SgsIRArvHpttrr----sfGVEPSGSGhidnsas--------sssSCLhQSaV
rgkhrk    p sa rqmdgrks g  wilwsgi sspwg    pv   sastrpthhcvn        kta  iy  pg
   fq     s qh  h  sstp    rrf twa tpa q    ts    t   catylt         nat  fr  sd
    s       ht  p  tcla        p f   s w    y         rnnii          r
             k     nl                       c          sk f
                   c                        l          vg g
                                                        y r
                                                        a

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

RKaAYshlSTskr--qSSSGHAVElhniPPs-SarsQSegpvfsCWWLQFRNSkPCSdYCLsHiVNLlEDWGPCtEhGEH
ettnpli  feg  ht tsrtm fqhlssn psgpegqrsilp    k  dte   eh  tlli  id     a y k
tk h av    k  kp a n    ncf  g  v  k k--ls        s q   k   c     r      d   q
  e   sh        a        ysv     t    a  -p                  f            y   r
      nf                  p           -   -                               v
      pn
      t


       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

hIRiPRTPARVTGGVFLVDKNPHNTtESRLVVDFSQFSRGntrVSWPKFAVPNLQSLTNLLSSNLSWLSLDVSAAFYHlP
n  t    s                a              syh                    d   i          i
r                                       ih
s                                       ts
                                        d




       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

LHPA-AMPHLLvGSSGLsRYVARLSSn--SR--ii-Nh----Q---hgTmQnLHdSCSRnLYVSLlLLYkTfGrKLHLYS
           i  c  pg       t      nf dy    k   yralpd  ny   q f   m  fq y w
                          h       n  n        r       e    h           l q
                          d       l  d                s
                                  h
                                  y



       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
.
HPIILGFRKIPMGVGLSPFLLAQFTSAICSVVRRAFPHCLAFSYMDDVVLGAKSVQHLESLftavTNFLLSLGIHLNPnK
   vm               m                       i  l     t   r a yasi h    v     th
                                            v  m                              s
                                                                              t





       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

TKRWGYSLnFMGYvIGswGtLPQeHIvqKiKqCFRKLPvNRPIDWKVCQRIVGLLGFAAPFTQCGYPALMPLYACIQaKQ
      t h    i  cy s   d  il l e      i   v                          k   t  tsr
      n         g         rh   m      t                              l      ht
                          km   h
                               d
                               l



       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

AFTFSPTYKAFLckQYlNLYPVARQRpGLCQVFADATPTGWGLaiGHqRMRGTFvaPLPIHTAELLAACFARSRSGAkli
  v      t  sq  mh        s                vma r l    ls                     nil
            rn   t        a                 l    i    q                      t
            nt                                        s
                                                      p
                                                      r
                                                      m


       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

GTDNSVVLSRKYTSFPWLLGCaANWILRGTSFVYVPSALNPADDPSRGRLGLyRPLLrLpfrPTTGRTSLYAvSPSVPSH
              y      t                             is    h lyq s        d      r
                                                   vc    c v            a
                                                    f





       890       900
....:....|....:....|.

LPdRVHFASP-LHVA--WrPP
  v               k
  g
  a