HBVdb::Dataset - Hepatitis B Virus Database

Dataset for protein Pol of genotype all

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

MPLSYQHFRkLLLLD--d--E---A--GPLEEELPRLADEgLNRRVAEDLNL--G-n-lNVSIPWTHKVGNFTGLYSSTV
     p   riv  e  egtdt e       d   h   ad  h          q l p  n                si
                 ne                                     d                      a






        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

PvFNPeWq-TPSFPhIHLqeDIinrCqQfVGPLTVNEkRRLkLIMPARFYPnvTKYLPLDKGIKPYYPehvVNHYFqTRH
c  sh k      d   hqnlvdk e y     i  n   q v  s  f kl   f me        dya d   ka
i   d l      n   k   ak  k       k  l   n         ts                ql
n   k        k        h             t             ih                ni
t   n        r        s                            f                 t
a   q                 t                            r
s                                                  g
                                                    a

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

YLHTLWKAGILYKREtTrSASFCGSPYSWEQeLqhg-rlvfqtst--rH----------G-deSFcsQssGILsRspVGp
         v     s h    f        d h-- -------k  -m            akplhp pp  fp psa s
                               k     aflikgp-  g             e  vrq  t  pa
                                     stslddkq                t   gh  a
                                      s  n  s                     a
                                            e                     t



       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

ciqSqlkqSRLGlQpqQGslArgqqGr-SgsIRArvHpttrr----sfGVEPSGSGhidnsas--------sssSClhQS
svrgkhrk    p sa rqmdgrks g  wilwsgi sspwg    pv   sastrpthhcvn        kta  iy
gl   fq     s qh  h  sstp    rrf twa tpa q    ts    t   cntylt         nat  fr
f    s       ht  p  tc a        p f   s w    y         ranii          r
               k     nl                       c          sg f
                     c                        l          vk g
                                                          y r
                                                          a

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

aVRKaAYshlSTskr--qSSSGHAVElhniPPs-SarsQSegpvfsCWWLQFRNSkPCSdYCLsHiVNLlEDWGPCtEhG
pg ettnplv  feg  ht tsrtm fqhlssn  sgpegqrsilp    k  dte   eh  tlli  id     a y
sd tk h ai    k  ka a n    ncf  g  v  k k--ls        s q   k   c     r      d
    e   sh        p        ysv     t    -  -p                  f            y
        nf                  p           a   -                               v
        pn
        t


       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

EHhIRiPRTPARVTGGVFLVDKNPHNTtESRLVVDFSQFSRGntrVSWPKFAVPNLQSLTNLLSSNLSWLSLDVSAAFYH
k n  t    s                a              syh                    d   i
q r                                       ih
r s                                       ts
                                          d
                                          l



       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

lPLHPA-AMPHLLvGSSGLsRYVARLSSn--SR--ii-Nh----Q---hgTmQnLHdSCSRnLYVSLlLLYkTfGrKLHL
i            i  c  pg    v  t      nf dy    k   yralpd  ny   q f   m  fq y w
                            d       n  n        r       e    h           l q
                            h       l  d
                                    h
                                    y



       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   .
YSHPIILGFRKIPMGVGLSPFLLAQFTSAICSVVRRAFPHCLAFSYMDDVVLGAKSVQHLESLftavTNFLLSLGIHLNP
     vm               m                       i  l     t   r a yasi h    v     t
                                              v  m






       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

nKTKRWGYSLnFMGYvIGswGtLPQeHIvqKiKqCFRKLPvNRPIDWKVCQRIVGLLGFAAPFTQCGYPALMPLYACIQa
h       t h    i  cy s   d  il l e      i   v                          k   t  ts
s       n         g         rh   m      t                              l      ht
t                           km   h
                                 d
                                 l



       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

KQAFTFSPTYKAFLckQYlNLYPVARQRpGLCQVFADATPTGWGLaiGHqRMRGTFvaPLPIHTAELLAACFARSRSGAk
r   v      t  sq  mh        s                vma r l    ls                     n
              rn   t        a                 l    i    q                      t
              nt                                        s
                                                        p
                                                        m
                                                        r


       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

liGTDNSVVLSRKYTSFPWLLGCaANWILRGTSFVYVPSALNPADDPSRGRLGLyRPLLrLpfrPTTGRTSLYAvSPSVP
il              y      t                             is    h lyq s        d
                                                     vc    c v            a
                                                      f





       890       900
....:....|....:....|...

SHLPdRVHFASPL-HVA--WrPP
r  v               k
    g
    a