HBVdb::Dataset - Hepatitis B Virus Database

Dataset for protein Pol of genotype RF

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                      * :              :   :: *       . :: .*  :     . *  .
MPLSYQHFRkLLLLDd--E--AGPLEEELPRLADEgLNRRVAEDLNLGNlNVSIPWTHKVGNFTGLYSSTVPvFNPeWqT
     p   r v  ee td       d   h   dd  h        qdp                  asi c  sh ki
               n                                l                     a i   d
               h                                                            k
                                                                            q
                                                                            n


        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
. **      .    *   ..*   ::   * :: *: *:*    * . .:* * : *   . :** :  **
PSFPhIHLqeDIinrCqQyVGPLTVNEKRRLkLIMPARFYPnlTKYLPLDKGIKPYYPEhaVNHYFqTRHYLHTLWKAGI
t  n   hqn vkk e f     i  n   q v     f kv      e        dyl     ka        q  v
    d   k   ld  k              n         tf                qv
    k   r    e                            i                nt
             h                            s                 i
             t                            r
                                          h

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
**:     . :  *:    ::                      :.     :.   .   ..   . *  :
LYKREtTrSASFCGSPYSWEQeLQHgrlvfqtstrhGdeSFcsQSSGILSRspVGpcvrSqlkqSRLGlQpqQGsLArgk
    vssh    y    t   dih------------ akpvhqkpp  sp ps  sslq khrkp   p sakrhm grq
                     k    afllkgpe m e  lrp     f       gi   fq t      h  q  ssp
                           sdid  k        t     p        f    h        t  p  t
                                 q                                           k
                                 s


       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   .        . .          .      .                            :    ..     .
sGrSgSIRArvHpttrrsfGVEPSGSGHidnsAS-------sssSCLhQSaVRKtAYshlSTskrqSSSGHAVElHnlPP
q ggwilwtgf ssawgpv    asprpttkltn       kta  fy  pd tathpavt fekhp  srt dfqhiss
p   r   v i  pp qts         nhhf         nat  ir  sg e  n li  tag a        ysf
             as  c           nsc         r    sn        d tf    n          ncv
                             atg                          ph
                               r
                               i

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
              *  .     * :         :    *      .  :  * :.    **  *  . .
nSaRsQsegPvfsCWWLQFRNSkPCSdYCLshIVNLlEDWGPCtEHGEHhIRiPRTPaRVTGGVFLVDKNPHNTaESRLV
s sgpkgqrsilp    k  sne   eh itlli  id     a y   n  t    s i   i          t
  t   nk  lp        dt        c     h      n     s                        e
  v        s                  f     r      d     r
                                           s     l



       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  * :* :    *. * * .** *:*:**:.  *  :*  : *           :* *: .  *:  *    .  .
VDFSQFSRGntrVSWPKFAVPNLQSLTNLLSSNLSWLSLDVSAAFYHiPLHPAAMPHLLVGSSGLsRYVARLSSnSRiin
         syh                    d   i          l           i  c  pg    v  t  nfd
         ih                                                               h   l
         ds                                                               d   n
         kn                                                                   v



       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
        ::  *    :  * **::*     ::****   *:** .:*   **** :    :        :* *: :.:
hQHgTmQnLHdsCSRNLYVSLlLLYkTfGrKLHLYSHPIILGFRKIPMGVGLSPFLLAQFTSAICSVVRRAFPHCLAFSY
ykyralpd  ny  kq     m   q y w         vm               m
n r n      n   h
c
d



       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*    *     : :      : :   :* :     *.  *:     .* *.  .  *: :   :    :  :*  * :.
MDDVVLGAKSVQHLESLftavTNFLLSLGIHLNPnKTKRWGYSLnFMGYvIGswGtLPQeHIvqKiKqCFRKLPVNRPID
i  l     t   r a yasi t  v       th         h    i  cy s   d  il lre      ih  v
v  m                             s                  g      s  rh   d
                                                           n  k    h
                                                                   m
                                                                   k


       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*   : : .  .*. ***: *:*** *: : :  : **     *:  *  :*  *           :*.  ..   *
WKVCQRIVGLLGFAAPFTQCGYPALMPLYACIQsKQAFTFSPTYKAFLcKQYlNLYPVARQRsGLCQVFADATPTGWGLa
       s                 k      haq      s   t  sq  mh        p                v
                         l                   v  rn  tt        a
                                                n
                                                y



       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
       *       :      .              .*:  :      . **  *  : * :       :     ** .
iGHqRMRGTFvaPLPIHTAELLAACFARSRSGAkliGTDNSVVLSRKYTSFPWLLGCAANWILRGTSFVYVPSALNPADD
m  r l    ls                     nil        a     y      t               s
l         q                      tv
v         s
          m
          p


       810       820       830       840       850
....:....|....:....|....:....|....:....|....:....|....
  *        :                 *   *   .      :.
PSRGRLGlyRPLLrLPFRPTTGRTSLYAvSPSVPSHLPdRVHFASPLHVAWrPP
       is    h lyq ss       d  f   r  v          t k
       pc    c     p        a  c      g
        f    l                        a