HBVdb::Dataset - Hepatitis B Virus Database

Dataset for protein Pol of genotype RF

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
              .     * *..  .       : :.  :. *     . * ::* *. :* :* . *     *
MPLSYQHFRkLLLLDd--EAGPLEeELPRLADEgLNRRVAEDLNLGNLNVSIPWTHKVGNFTGLYSSTVPvFNPeWqTPS
     p   r v  eegtd     d   h   ad  h    e h qdp  n               asi c  sh ki
               n                              l                     a n   d l
                                                                      i   k
                                                                          q
                                                                          n


        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   * :  :    *  :**.*  .* * : ::**: ::*  .** * .:*:: ***:  . *** :  **  *     **
FPhIHLqeDIinrCqQfVGPLTVNEkRRLkLIMPARFYPnlTKYLPLDKGIKPYYPEhaVNHYFqTRHYLHTLWKAGILY
  n   hqnlvdk e y     i  n   q v     f kv   f  e        dyv     ka        q  v
  d   k   lk  k       k  t   n         tf                nl
  k   n    e             l              s                qt
           t                            r                 i
                                        i
                                        h

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
:   :   :: *:   * :                      :.    .:.. *. . .:   . ** *  :  :
KREtTrSASFCGSPYSWEQeLQHGrlvfqtstrhgdeSFcsQSsGILsRspVGpcvrSqlkqSRLGlQpqQGsLArgqqG
  vssh         t   d h  -----------akplhq ppr fp ps  ssiq khrk    p sakrhm grks
                   k    aflikgpk m e  vrp  t  p       gl   fq        t  q  sspp
                           ld  s v k                   f   yh        h  p  tc
                               q



       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
.        . .        : .                        .  .:           .
rSgSIRArvHpttrrsfGVEPSGSGhidnsASsssSCLhQSaVRktAYshlSTskrqSSSGHAVElHnlPpnSaRSQser
g wilwtgfrssawgpv    astrptthcvnkta  fy  pg tatnpav  feghp tsrt  fqhfsss sgpkgqg
  r   v i tap qts     v   nhslt nat  in  sd ee h li  tak a        ysi    t  e k
        a  ps  c          vnif  r     r          pf    n          ncv
               y           akg                   s
                           pyi                   t
                             r

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
    **  ::    . *      : .*    *.*   ... *  * ** * :.** ** . .    :      * :**:
pvfpCWWLQFRNSkPCSdYCLsHIVNLlEDWGPCaEHGEHhIRiPRTPARVTGGVFLVDKNPHNTaESRLVVDFSQFSRG
sils    k  dte   eh iclli  id     t y   r  t    s                t
ls          q   k   t     r      d     n                        e
  p                  f                  l
                     y



       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   ******. ** *:*:***.* *  :*  : *.    *      ** : .* *:  * :  .  :            :
nyRVSWPKFAVPNLQSLTNLLSSNLSWLSLDVSAAFYHiPLHPAAMPHLLVGSSGLSRYVARLSSnSRifNhQHgTlQnL
sth                    d              l           i  c  pg    v  t  nidnkyrnmpd
ih                                                               d   l y   i
dn                                                               h   n
ka                                                                   v
                                                                     h


       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
:  * :     : **: . *   ::****: :**** .:* * .**  .**  :: *   .
HdSCSRnLYVSLlLLYKTfGrKLHLYSHPIILGFRKIPMGVGLSPFLLAQFTSAICSVVRRAFPHCLAFSYMDDVVLGAK
ny  kq f   m   q y w         vm               m                       i  m
      h                                                                   l





       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                   * ::.  .*.  *:.::  .* **  *  ** *   .    * :.*  * :  .  * : .
SVQHLESLftAVTNFLLSLGIHLNPnKTKRWGYSLnFMGYvIGswGtLPQeHIvqKIKqCFRKLPVNRPiDWKVCQRIVG
t   r a yasi            th         h    i  cy s   d  ih l e      ih  v
                                           g      s  rl   d
                                                  n   r   m
                                                  t       h
                                                          l
                                                          s

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
:***. ***: *:.** * *  :    .* *   *:. *      *   : :  .   *.  :*    .
LLGFAAPFTQCGYPALMPLYACIQsKQAFTFSPTYKAFLcKQYLNLYPVARQRpGLCQVFADATPTGWGLaiGHqRMRGT
                l       aql     l   t  sq  mh        s                vm  r l
                k        r             rn   t                          l
                                       nt
                                       y



       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
:        .   .     .  *    *.*: .** :: *::** :*  :           :     **..*  .
FvaPLPIHTAELLAACFARSRSGAkliGTDNSVVLsRKYTSFPWLLGCAANWILRGTSFVYVPSALNPADDPSRGRLGly
ls                  f  nil        a     y      t               s             is
q                      tv                                                    pc
m                                                                             f
p
s


       810       820       830       840
....:....|....:....|....:....|....:....|....:
  :           . *      .*   .      :.:     **
RPLLrLpfRPTTGRTSLYAvSPSVPSHLPdRVHFASPLHVAWrPP
    h lyq ps       d  f   r  v          t k
    c   l s        a         a
    l                        g