HBVdb::Dataset - Hepatitis B Virus Database

Dataset for protein Pol of genotype C

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
             *                      :.    .             ..   .    **      .
MPLSYQHFRKLLLLD--D--EAGPLEEELPRLADEGLNRRVAEDLNLGNLNVSIPWTHKVGNFTGLYSSTVPVFNPeWQT
         r       n  d              d  h    e    dp                    a i  sd k
                 h                              t
                 e


        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
* :   :             .  . .              .          .                   :      *
PSFPhIHLqEDIInRCQQyVGPLTVNEKRRLKLIMPARFYPNlTKYLPLDKGIKPYYPEHaVNHYFkTRHYLHTLWKAGI
    n   k    d  e f    ni      s       f kr                yi     qa
    d   r    t                            f                nt
    r                                     i                 v


       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
          .    .:                                                          :
LYKRETTRSASFCGSPYSWEQELQHG-RLVFQTSt--RHGDesFCSQSSGILSRSPVGPcvRSQlKQSRLGLQPQQGSlA
       h                -- ----k  k      kpvgak a  faqps  sgiq kfq     s s   pm
                            sflh  e        lr              sfw



       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

rGksGRSGsiRArVHpTTRr----SFGVEPSGSGHIDNSaS--------StSSCLHQSAVRKTAYSHLSTSKRQSSSGHA
sstp   ril tg  s p q    p    sad rrtn gtn        ga   iy    gea ha f  a  kp a rt
c la     f       s                pf  r          cs   h                  h
g q                                v             n


       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                               .                             * ..    .   : ..
VELhniPPSSARsQSeGPilSCWWLqFRNSKPCSDYCLtHIVNLLEDWGPCTEhGEHnIRIPRTPARVTGGVFLVDKNPH
m fqhfssn t pk k--lfp    k  dr     h  s li         a y   h
     l  g v    arsvp                                 n   s
               -  --                                     r
                   s

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *.       :   *       . * .. : * :   .          ..  .   :.   . :   . **
NTTESRLVVDFSQFSRGSThVSWPKFAVPNLQSLTNLLSSNLSWLSLDVSAAFYHiPLHPAAMPHLLVGSSGLPRYVARL
  a                r                    d   i          l           i  c  sg
                   q
                   k


       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                     :             :     .     : :  .    : .  :
SSTSR--NI-Ny----QHGtMQDLHdSCSRNLYVSLLLLYKTFGRKLHLYSHPIILGFRKIPMGVGLSPFLLAQFTSAIC
  n    if dh    kyral n  nt  kh  d  m       q         vf               m
        n  n    h        e    k                        m
        l


       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                   :                   :   * :    . .  .             .   : *   .
SVVRRAFPHCLAFSYMDDVVLGAKSVQHLESLFTsiTNFLLSLGIHLNPNKTKRWGYSLNFMGYVIGsWGTLPQEHIVlK
  i            i        t     a y av    v        h         h       c  s   d  iq
               v                                 t                            h



       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     :  .   .   .            .     .  .  *: :      *       .                : .
iKQCFRKLPvNRPIDWKVCQRIVGLLGFAAPFTQCGYPALMPLYACIQsKQAFTFSPTYKAFLCKQYLnLYPVARQRsGL
l h   q  i                              l   s  ha       s   t   q  mh        p
         t                                      t                   t        a



       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  .    :    .                           :                 :              .   :
CQVFADATPTGWGLAiGHqRMRGTFVAPLPIHTAELLAACFARSRSGAkLIGTDNSVVLSRKYTSFPWLLGCAANWILRG
               ma r l    m                      nil
               l                                t
               v


       810       820       830       840       850       860       870
....:....|....:....|....:....|....:....|....:....|....:....|....:....|.
          : :    :       .                               :  *         *
TSFVYVPSALNPADDPSRGRLGLYRPLLrLPFRPTTGRTSLYAVSPSVPSHLPdRVHFASPLHVA--WrPP
                      i     h   q p        d  n   rp v              k
                            c                        g
                            l                        a
                            s