HBVdb::Dataset - Hepatitis B Virus Database

Dataset for protein Pol of genotype C

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                        ..     :          .
MPLSYQHFRKLLLLD--D--EAGPLEEELPRLADEGLNRRVAEDLNLGNLNVSIPWTHKVGNFTGLYSSTVPVFNPeWQT
                 n  d              d  h    e    dp                    a i  sd k
                 e
                 h


        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
* :*                .    .              .          .                   :
PSFPhIHLqEDIInRCQQyVGPLTVNEKRRLKLIMPARFYPNlTKYLPLDKGIKPYYPEHaVNHYFkTRHYLHTLWKAGI
    n   k    d  e f    ni      s       f kr                yi     qa
    d   h    t                            f                nt
    r   r                                 i                 v


       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
          .    .:                                 :                        :
LYKRETTRSASFCGSPYSWEQELQHG-RLVFQTSt--RHGDeSFCSQSSGILSRSPVGPcvRSQlKQSRLGLQPQQGSlA
       h                -- ----k  k      kpvgak a  faqps  sgiq  fq     s s   pm
                            sflh  e        lr              sfw



       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

rGKsGRSGsiRARVHpTTRr----SFGVEPSGSGHIDNSaS--------StSSCLHQSAVRKTAYSHLSTSKRQSSSGHA
sstp   ril tg  s p q    p    sad rrtn gtn        ga   ir     ea ha f  a  kp a rt
c la     f       s                pf  r          cs   hy                 h
g q              a                 v             n
k

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                               .                             * ..    .   : .. .
VELhniPPSSARsQSeGPilSCWWLQFRNSKPCSDYCLtHIVNLLEDWGPCTEhGEHnIRIPRTPARVTGGVFLVDKNPH
m fqhfssn t pk k--lfp    k  dr     h  s li         a y   h
     l  g v    arsvp         n                       n   s
               -  -s                                     r
                   -

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
            :   *         * .. : * :     :        .   .        . :      :
NTTESRLVVDFSQFSRGSThVSWPKFAVPNLQSLTNLLSSNLSWLSLDVSAAFYHiPLHPAAMPHLLVGSSGLPRYVARL
  a                r                    d   i          l           i  c  sg
                   q
                   k


       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                     .             :     .   . : :  .    : .  :
SSTSR--NI-Ny----QHGtMQDLHdSCSRNLYVSLLLLYKTFGRKLHLYSHPIILGFRKIPMGVGLSPFLLAQFTSAIC
  n    if  h    kyral n  nt  kh  d  m       w         vm               m
        n  n    h        e    k             q          f
        l


       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                   :                :      * :    . .  .             .   : *   .
SVVRRAFPHCLAFSYMDDVVLGAKSVQHLESLFTsiTNFLLSLGIHLNPNKTKRWGYSLNFMGYVIGsWGTLPQEHIVlK
  i            i        t     a y av    v        h         h       c      d  iq
               v                                 t                            h



       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     :  .   .   .            .     .  .  *: :      *       .                  .
iKQCFRKLPvNRPIDWKVCQRIVGLLGFAAPFTQCGYPALMPLYACIQsKQAFTFSPTYKAFLCKQYLnLYPVARQRsGL
l h   q  i                              l      ha       s   t   q  mh        p
         t                                      t           v       t        a



       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  .    :    .                                                   .        .   :
CQVFADATPTGWGLAiGHqRMRGTFVAPLPIHTAELLAACFARSRSGAkLIGTDNSVVLSRKYTSFPWLLGCAANWILRG
               ma r l    m                      nil
               l                                t
               v


       810       820       830       840       850       860       870
....:....|....:....|....:....|....:....|....:....|....:....|....:....|.
          : :    :       .                               :  .
TSFVYVPSALNPADDPSRGRLGLYRPLLrLPFRPTTGRTSLYAVSPSVPSHLPdRVHFASPLHVA--WrPP
                      i     h   q p        d  n   rp v              k
                            c                        g
                            l                        a
                            s