HBVdb::Dataset - Hepatitis B Virus Database

Dataset for protein Pol of genotype C

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
          :              :          :.   :.             .    .    **      .
MPLSYQHFRKLLLL--DD--EAGPLEEELPRLADEGLNRRVAEDLNLGNLNVSIPWTHKVGNFTGLYSSTVPVFNPeWQT
         r       n  d              d  h    e    dp  n                 a i  sd k
                 e




        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
* :*  .             .  .                .      .   .                   *      *
PSFPhIHLqEDIInRCQQyVGPLTVNEKRRLKLIMPARFYPNLTKYLPLDKGIKPYYPEHaVNHYFkTRHYLHTLWKAGI
    n   k    d  e f     i      r v     f kr   w            yt     qa           v
    d   r    t                            i                ni
    q                                                       v



       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
          .    .*                              .                      .    .
LYKRETTRSASFCGSPYSWEQELQH-GRLVFQ--TStRHGDesFCSQSSGILSRSPVGPcvRSQlKQSRLGLQPQQGSlA
       h                - -----h    k    kplgakp   faqps  sgiq  f        s   pm
                            sflk    e      vr              sfw




       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

rGKsGRSGsIRARVHpTTRr----SFGVEPSGSGHIDN--------SaSStSSCLHQSAVRKTAYSHLSTSKRQSSSGHA
sstp    ilwtg  s p q    p    sad rrtn         gtnca   hy    gea h  f  aq h    rt
  qa             s      y         pfg         r r s   f
                                   v



       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                      .        . .              *            * ..    .  :::.
VElhnIPPSSARsQSEGPilSCWWLqFRNSKPCSDYCLtHIVNLLEDWGPCTEhGEHnIRIPRTPARVTGGVFLVDKNPH
m fqhfssn t pk krslfp    k  dr     h  s li         a y   h
     v  g v     e vp                                     s
     l             s
                   x


       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *.   .   .   *       : * .. : * :   .   . . *  ..  *   .. : . :   . **
NTTESRLVVDFSQFSRGSThVSWPKFAVPNLQSLTNLLSSNLSWLSLDVSAAFYHiPLHPAAMPHLLVGSSGLpRYVARL
  a                r                    d   i          l           i  c  sg
                   q                                                     q
                   k



       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
.                        .             :     .     : :  *    :    *       :
SSTSR--N-I----N----YQHGTMQDLHdSCSRNLYVSLLLLYKTFGRKLHLYSHPIILGFRKIPMGVGLSPFLLAQFT
       i f    h    hkyral n  nt  kh  d  m       q         v         l      m
         n    d    nh        e    k
         l



       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                       :             .     :   * .    . .  *    : *      .   . *
SAICSVVRRAFPHCLAFSYMDDVVLGAKSVQHLESLFTsiTNFLLSLGIHLNPNKTKRWGYSLNFMGYVIGsWGTLPQEH
      i            i        t     a y av    v        t         h      dc  s   d
                   v                                 h




       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   :     .  .   .                .     .  .  *: :.     **  .
IVlKiKQCFRKLPvNRPIDWKVCQRIVGLLGFAAPFTQCGYPALMPLYACIQsKQAFTFSPTYKAFLCKQYLnLYPVARQ
iq l h      i           l                  l      ha       s   t   q  mh
  h                                         k                   v       t




       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
. .   .    :   ..                         . :   . *           :    :  *      . .
RSGLCQVFADATPTGWGLAiGHrRMRGTFVAPLPIHTAELLAACFARSRSGAkLIGTDNSVVLSRKYTSFPWLLGCAANW
p                 m  q l    m                      nil              y
a                 l  k                             t
                   v



       810       820       830       840       850       860       870
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:.
:            : :    *       .            .               .  :  *      .  *
ILRGTSFVYVPSALNPADDPSRGRLGLYRPLLhLPFRPTTGRTSLYAVSPSVPSHLPdRVHFASPLHV--AWrPP-
                          i     r   q p        d      rp v              k
                                c                        a
                                l                        g
                                s
                                q