HBVdb

Dataset for nucleotide sequence PreS1 of genotype all

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
ATGgga---ggttggtcttccaaacctcgaaa------aggcatg---GGGacgAATCTTTCtgttccCAAtCCtCTGGG
------   --------------------cc-      -------     acaa  c ac  caccaga  c  c     
     g   ctacctcgaa agtca aat--g      g aatg               g  g  g        a     
          c  a  tgc g cg     g                                   a        g     
                 c                                                              

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
ATTCTTtCCCGAtCAcCAGTTGGAcCCtGCaTTCagAGCcAActCaaacAATCCAGATTGGGACtTCAAcCCcaaCAAGG
   tc c  a gc  t   c    t  actg   gag  a  ta cgca g   c  c     tca   taagct   a 
      g                    g  c                g                        a       
                              t                                                 
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
AccacTGGCCaGacGCcAAccAGGTaGGA---GtgGGAGCATTCGGGCcaGGgTTCACcCC---aC---CaCAcGGcgG-
 tact   a gccgt acgta    g       ct   tgc at  t tg  ac   tt     t     c  t  aaa 
   ga     tata   t g              a     t     a  t  t     a     c     g     g   
             t                                c                 g     t     t   
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-----------tcTtTTGGGGTGGAGCCCTCAGGCTCAGGGCaTAtTgacaACagTGCCAgcAgctCCtCCTCCTGCCTC
           ca gc          t  g  a  a  a  tccgc acactatt at  atgaaa  g        a  
           ag                a            g ta cg t  c          tg  a        t  
            t                                  t     g                          
                                                                                

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
cACCAATCGgCAGTCAGGAAGgC---AGCCTACtCCcaTcTCTCCACCTcTaAG------agACAcTCATCCTCAGGCCA
tg       c g atc  gc aa    a  a  c  gc aa        t g        ga a ga     a  a  ag
         t   g                c     at g                          g     g       
                                    tg t                          c             
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
TGCAGTGGAAcTCCAcaaCaTTCCACCAAgCTCTg---CaaGAtCCCAGAGTgAGgGgcCTgTAttTtCCTGCTGGTGGC
ca  a     t  a gcgac  t  t  ga c  t   ttga c  g ag  ccaa ct--a--cc-c            
             t  tc t              a           a     a    --  t  --              
                   g                                         c                  
                                                             -                  

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
TCCAGTTCaGGAACAGTaAaCCCTGtTCcGAcTAcTGcCTCtccCATaTCGTCAATCTtctCGAgGAcTGGGGACCCTGc
  a     c aggt cag g     c  aa ac t  t   aga tcc  a    c  cagt  a  t     g  t  t
                cc                       gtt                    c               
                                                                                
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
accGAAcATGGAGAaCAtcaCATCAGGAtTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAgAA
gat   t     agg  cag        c    c        t    c           t  g     c        a  
tt          c      t                                                            
                                                                                
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
TCCTCACAATACCaCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAaCacCCgtGTGTCtTGGCCAA
             ga                              g           aggtta  ac     c       
                                                          ct c    g     g       
                                                           c      a             
                                                                                

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
AATTcGCAGTCCCcAAcCTCCAaTCACTCACCAACCTctTGTCCTCCAAtTTGTCCTGGtTATCGCTGGATGTGTCTGCG
    t        a  t     g     t  t   t gc        g c         c     t       a      
                                                           a                    
                                                                                
                                                                                

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                     *                                                          
GCGTTTTATCATcTTCCTCTtCATCCTGCT---GCTATGCCTCATCTTCTTgTTGGTTCTTCTGGAcTAtCAAGGTATGT
            a     t g                              a         g    t gc  g       
                                                                                
                                                                                
                                                                                

       890       900       910       920       930       940       950       960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
TGCCCGTTTGTCCTCTAaTTCCAGG------AtCatCAACc------------aCCAGcACgGGACCaTGCAaaACCTGC
       c        gc              a ta-g--tac    acaaca--a  tgtc  g  c   cgg      
       g        c                 c- -  a                                       
                                        -                                       
                                        g                                       

       970       980       990      1000      1010      1020      1030      1040
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
ACgAcTCCTGCTCAAGGaAcCTCTATGTtTCCCTCaTGTTGCTGTACaAAACCTtCGGAcGGAAAtTGCACcTGTATTCC
 tagtaat  t      c a    t   a      t  c  t   t c     ca    ta    c     t        
                                   c                                            
                                                                                
                                                                                

      1050      1060      1070      1080      1090      1100      1110      1120
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
CATCCCATCaTCtTGGGCTTTCGcAAaATtCCTATGGGAGTGGGCCTCAGtCCGTTTCTCcTGGCTCAGTTTACTAGTGC
         g  c        a g  g  a                    c         t                c  
            a          t                                    a                   
                                                                                
                                                                                

      1130      1140      1150      1160      1170      1180      1190      1200
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
        *                                                                       
CATTTGTTCAGTGGTTCGTAGGGCTTTCCCCCACTGTtTGGCTTTCAGtTATATGGATGATGTGGTaTTGGGGGCCAAGT
a              g  cc             t   c       t  c   g t      c    tc       g  aa
                                                             a                  
                                                                                
                                                                                

      1210      1220      1230      1240      1250      1260         
....:....|....:....|....:....|....:....|....:....|....:....|....:....
                                                                     
CTGTACAaCATCTTGAgTCCCTTTtTaCCgCTgTTACCAATTTTCTTTTGTCTtTGGGTATACATTTaA
    g cg  c g   ag      a g  t  a     c       gc a   c    c  c   c g 
                                                     g               
                                                                     
                                                                     
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