HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence C of genotype RF

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                              *        *  *    *               *
A------------------------------------TGGACATTGACCCgTATAAAGAATTTGGAGCTtCTGTGGAGTT
tggatagaacaactttgccatatggcctttttggct a     c  ta t                 ga ctc
                                                  a                 a  a
                                                  c

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                         *  *                       **                 *  *
ACTCTCtTTTTTGCCTTCTGAcTTCTTTCCtTCtaTtCGaGATCTcCTcGAcACCGCCTCaGCTcTGTATCGGGAgGCCT
g     g         ga   t  t  c  gg ag aa g  c  ta a  t  t  tg t  ct actca a  tt tc
      a         a             a  c  c  t     a  t     a  aa c  g  c        a  g
                c                g     c                    g                 a

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*  *          *              *  ** **  *                 * **
TAGAGTCTCCgGAaCATTGtTCACCTCACCATACaGCACTCAGGCAAGCtATTCTgTGtTGGGGtGAgtTgATGAaTcTg
    a  ct t  g  c  ca gg    t  c  t  ca a       aag ct t  c    tg  ac a    c t a
             t        t           g  t           c   g c        a  c           t
                                                       a           t

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
      ****  *      *                 *     *               * *                 *
GCcACCTGGGTGGGaagTAATTTGGAAGAcCCAGCATCcaGgGAatTAGTAGTCAGcTATGTCAAtgtTAATATGGGCCT
  t  t        tgta     ac c  t atatc  tc a  cccga g  agat     t  cac c cg    tt
              c c                  t        tga   t  t
                a

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  *                 ** * *     *              *                    *   *       *
AAAaaTcAGaCAAcTatTGTGGTTTCACATTTCcTGTCTtACTTTTGGaAGAGAAACtGTtcTtGAgTATTTGGTGTCTT
g  gt t  g   t cc a        tgc   t  c  c tg     g a c c tc  ca a  a  c     a  c
    c        a g            c    a        c           t  g  at g           c
                                          a           g  a  gg

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     * *      *   *  *             **     * **   * ** ** *     ***   *        *
TtGGAGTGTGGATTCGCACTCCTcCcGCtTAcAGACCACCAAATGCCCCTATCtTATCAACACTTCCGGAaACTACTGTT
c                    caatc a  t      tat            c    c           g   tg a
                        ta  c


       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     *                **     *            *   *         *            *   *
GTTAGACGAc------GAGGCAGGTCCCCTAGAAGAAGAACTCCCTCGCCTCGCAGACGAAGgTCTCAATCGCCGCGTCG
a     ga agggacc  t     a     c     c          a            c a        a
       c   a


       570       580       590
....:....|....:....|....:....|....
      *       **       *    **
CAGAAGATCTCAATCTCGGGAATCtCAATGTTAG
c     a  gc     catctc ct       a
          a         g