HBVdb

Dataset for nucleotide sequence PreS2 of genotype H

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                 *  *  *   **  ***   * **  *** *** * **           **************
ATGCAGTGGAACTCAACACAGTTCCACCAAGCACTGTTGGATCCGAGAGTaAGGGGtCTGTATtTTCCTGCTGGTGGCTC
gnnnnnnnnnnnnnnct ag ca aca  tc   atc a  ct   a   g a  cg------c--              
n                                         a       c          g -                

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
******* ******* * ** **  ********** ***** * **** **** *** **** ********* ****   
CAGTTCAGAAACACAGAACCCTGCTCCGACTATTGcCTCTCTCACATCATCAATCTTCTCGAAGACTGGGGACCCTGcTA
       a       a g  y  tg          t     a g    g    c   a    m         t    tyc
                                                              c                 

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
******** ********************* * *** ** ** *********** ***** ***** ********** **
TGAACATGGAGAACATCACATCAGGACTCCTAGGACCCCTTCTCGTGTTACAGGCGGTGTGTTTCTTGTTGACAAAAATC
        a                     c a   t  g  c           g     t     c          g  
                                                                  g             

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
* ** *** **   *** **************************** ***** ************************** 
CTCACAATACCAcAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGTACCACCCGGGTGTCCTGGCCAAAA
 g  a   g  cag   g                            c     a                          g
 k                                                                              

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
** *********** ************** ** *** *************************** ***************
TTCGCAGTCCCCAATCTCCAATCACTTACCAACCTCCTGTCCTCCAACTTGTCCTGGCTATCGTTGGATGTGTCTGCGGC
  y           c              a  t   t                           c               
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
****** ***************** ******* ****   *   ***   **   *************************
GTTTTATCATCTTCCTCTTCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTATCAAGGTATGTTGCCC
      c                 g       g    tca cgt   cct  gtg                         
                                          c                                     

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
***********************  **************** ******** *********** * ********** ****
GTGTGTCCTCTACTTCCAGGATCtACAACCACCAGCACGGGACCCTGCAAAACCTGCACCACTCTTGCTCAAGGAACCTC
                       at                t        g           g y          c    
                       wc                                                       

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
**** ******* ** ** ****  ************************************** ** *********** *
TATGTTTCCCTCcTGCTGCTGTACCAAACCTTCGGACGGAAATTGCACCTGTATTCCCATCCCATCATCTTGGGCTTTCG
    c       t  t  t    ta                                      g  g           a 
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
**** *********** ******************** **************** ** ***** *************** 
GAAAATACCTATGGGAGTGGGCCTCAGCCCGTTTCTCTTGGCTCAGTTTACTAGTGCAATTTGtTCAGTGGTGCGTAGGG
    t           t                    a                c  c     c               a
                c                                                               

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
********** *** **** **  * *** ******** ********************** ** ********* ** **
CTTTCCCCCACTGTCTGGCTTTTAGTTATATGGATGATtTGGTATTGGGGGCCAAATCTGTGCAgCATCTTGAGTCCCTT
          t   t    c  cg c   g        c                      a  a         g  a  
                                      g                         t               

       810       820       830       840      
....:....|....:....|....:....|....:....|....:.
******************************************** *
TATACCGCTGTTACCAATTTTTTGTTATCTGTGGGCATCCATTTgA
                                            a 
                                            r 
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