HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence C of genotype F

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
******** ****  * ********  ** ** **    **  *  *  * *****  *    ** *  *  **
ATGGACATTGACCCTTATAAAGAATTTGGAGCTTCTGTGGAaTTaCTCTCTTTTTTGCCTTCTGAtTTCTTCCCgTCaGT
        c                    c      ac   gc g     g         atc  c    at  a  gac
                                     g                      ca            t  t
                                                            g
                                                            k

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  *  *  *  *  *  ****   * *  *        *     *  * **  *  * *      *       ** *  *
TCGGGACCTACTCGACACCGCTTCAGCcCTcTACcGGGATGCTtTAGAgTCACCaGAACATTGCACcCCcaAcCATACcG
a     t   a          c     t  tctta       gc ga a     g  g      t a atc t  c  t
                              g                       t           t   m
                              a


       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *  * **   *       * **    **  *        * *       ** ***  *     *  *  *  ***
CTCTCAGGCAAGCTATtTTGTGcTGGGGTGAgTTAATGACTTTGGCTTCCTGGGTGGGcAATAAtTTGGAaGAcCCTGCa
ca         t g ag a  t   aa   ag   cagt   c  ca          tc c  c   c g  t    gt
                c                      a   t   g          g           c
                                                                      t


       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
    *  *        *  * * *** ** *       ***  * **       *         *******    ** *
GCtAGGGAttTAGTaGTTAAcTATGTcAAcACTaAcATGGGCcTaAAaATTAGACAAtTgtTGTGGTTTCACATTTCCTG
t c     cc c  g     t     t  t t c t      t g  g  c a    c ac           rc
           g                   a                         a



       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  *    ** *  *         **    *   * * *  *  *  *  * **** * * *** **       **    *
cCTTACTTTTGGAAGAGAAACAGTTCTTGAGTATTTGGTGTCcTTTGGAGTGTGGATTCGCACTCCtCCtGCTTATAGAC
ta attg         c tgt    g ac             t     g                 agtacta  c  g
                  c      a                                          a



       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
    ******** **** ****    * *** **         * * * *           *  * **
CACCAAATGCCCCTATCcTATCCACACTTCCGGAAACTACTGTTGTTAGACGAC------GAGGCAGGTCCCCTaGAAGA
  ga             t                 gt g     a     ga a        c     annnnncnnnnn
                                                   c                  t   n



       490       500       510       520       530       540       550
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:...
              * *   *  *** *** ***  * * *   *     **** *** ***   * *    *****
AGAACTCCCTCGCCTCGCaGACGAAGgTCTCAATCGCCGCGTCGCAGAAGATCTCAATCTCCAGCTTCCCAATGTTAG
nnnnnnnnnnnnnn    ca      a        a   g     cac               t    t gc