HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence S of genotype D

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                               *
ATGGAGAACATCACATCAGGATTCCTAGGACCCCTgCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAGAATCCTCAC
     a g             c             t                      c           ag
                     y



        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                  *                                                *
AATACCGCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGaACtACCGTGTGTCTTGGCCAAAATTCGC
      aa                              g           ag ac          g
                                                      y
                                                      g
                                                      a

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                    *                             *  * **                *
AGTCCCCAACCTCCAATCACTCACCAACCTCCTGTCCTCCAACTTGTCCTGGTTATCGCTGGATGTGTCTGCGGCGTTTT
                               t        g     a     a     t       a
                                        r



       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                          *  *
ATCATcTTCCTCTTCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTATCAAGGTATGTTGCCCGTtTG
     a                                                       gg              c
     m                                                        c              g



       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

TCCTCTAATTCCAG------GATCtTCAACcACCAGCacGGGACCaTGCaGAACCTGCACGACTcCTGcTCAAGGAACCT
      gc                c  g  t      gt    t c   cag       t   aat  t  g
                        a     a            a       c           c
                        g


       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                         *             *  * *        *       *
CTATGTATCCCTCCTGTTGCTGTACcAAACCTTCGGACGGAAATTGCACCTGTATTCCCATCCCATCATCcTGGGCTTTC
     at      a  c  t    ta     c t   t     c     a                 g  t
             t           m                                            a



       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *          *                                             *     *
GGAAAATTCCTATGGGAGTGGGCCTCAGCCCGTTTCTCcTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGTAGG
c                          t         t          c         c                c
                                      a



       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                      *
GCTTTC------CCCCACTGTTTGGCTTTCAGTTATATGGATGATGTGGTATTGGGGGCCAAGTCTGTACAgCATCTTGA
                 t   c       t      g t           t           aa   cgtca  c
                 y           y                                r     t  c  y
                                                                       r


       650       660       670       680       690
....:....|....:....|....:....|....:....|....:....|...
                         *
GTCCCTTTTTACCGCTGTTACCAATTTTCTTTTGTCTTTGGGTATACATTTAA
g      a                      c     c    cg      ---
                               a     g             g