Dataset for nucleotide sequence Genomes of genotype D
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| 10 20 30 40 50 60 70 80 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** * * * * cTCCACAACCTTCCACCAAACTCTGCAAGATCCCAGaGTGAGAGGCCTGTATTTCCCTGCTGGTGGCTCCAGTTCAGGAA t aa ag at t t g gt a ag ag c t a c c agg a t 90 100 110 120 130 140 150 160 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** * * * * ** * ** *** CAGTAAACCCTGTTCCGACTACTGtCTCTCcCaTATCGTCAATCTTCTCGAGGATTGGGGACCcTGCGCTGAACATGGAG cg t c ca g a tc t a c t tatc a a 170 180 190 200 210 220 230 240 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * * ** ** * * * * * * * AACATCACATCAGGATTCCTAGGACCCCTgCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAGAATCCTCACAATACC g c t c a 250 260 270 280 290 300 310 320 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** * * **** * * * * ** * * ** GCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGaACtACCGTGTGTCTTGGCCAAAATTCGCAGTCCC aa g g ac g g a 330 340 350 360 370 380 390 400 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** * * ** * ** * ** * ** * CAACCTCCAATCACTCACCAACCTCCTGTCCTCCAACTTGTCCTGGTTATCGCTGGATGTGTCTGCGGCGTTTTATCATC t g a t a c a 410 420 430 440 450 460 470 480 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** ** ** ** * * * ** * * ** ** TTCCTCTTCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTATCAAGGTATGTTGCCCGTtTGTCCTCT t c c gg c a c g 490 500 510 520 530 540 550 560 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** * ** * * * AATTCCAGG------ATCtTCAACcACCA---------GCacGGGACCATGCaGAACCTGCACGACTcCTGcTCAAGGAA gc c g t gt t c cag t t t at t c a a a g 570 580 590 600 610 620 630 640 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * ** * *** ** * *** ****** * **** ** * ** CCTCTATGTATCCCTCCTGTTGCTGTACCAAACCTTCGGACGGAAATTGCACCTGTATTCCCATCCCATCATCcTGGGCT t a c t a c t ta c t t a 650 660 670 680 690 700 710 720 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * ** * * * * ** ** ** ** * * * * * * ** ** * TTCGGAAAATTCCTATGGGAGTGGGCCTCAGCCCGTTTCTCCTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGT c c t c c a 730 740 750 760 770 780 790 800 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * * ** ** * ** ** * * * *** * * * * AGGGCTTTCCCCCACTGTTTGGCTTTCAGTTATATGGATGATGTGGTATTGGGGGCCAAGTCTGTACAgCATCTTGAGTC t c t g t g aa cttca c ag c g c 810 820 830 840 850 860 870 880 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** * * ** * * ** * ** ** ** ***** CCTTTTTACCGCTGTTACCAATTTTCTTTTGTCTTTGGGTATACATTTAAACCCTAACAAAACaAAaAGATGGGGTTACT a c c c cg c g t cc t g t gc g g t a g g c 890 900 910 920 930 940 950 960 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * **** ** * ** * * ** ** ** * ** CTtTAcATTTcATGGGcTATGTCATTGGAtGTTATGGgTCaTTGCCACAAGAtCACATCAtACAgAAAATCAAAGAaTGT cc ga c t t agt ca cgg a c a g g a t tgg ta gc t c c c c g tg t g a c g g t a t g 970 980 990 1000 1010 1020 1030 1040 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * * ** * ** * * * * * * ** ** TTTAGAAAACTTCCTgTTAACAGgCCtATTGATTGGAAAGTcTGTCAACGtATTGTGGGTCTTTTGGGTTTTGCTGCCCC cc g c a c tc a a a ga a a c cc a g c t c g c c a t a 1050 1060 1070 1080 1090 1100 1110 1120 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** ** * * ** ** * ** * * ** * * TTTtACACAATGTGGTTATCCTGCtTTaAtGCCcTTGTATGCaTGTATTCAaTCtAaGCAGGCTTTCACTTTCTCGCCAA g c g g g gc g a t a c c c gg gcga t c t c a t c a c c a 1130 1140 1150 1160 1170 1180 1190 1200 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** ** * * ** ** * ** * * * * * * CTTACAAGGCCTTTCTGTGTAAACAATAcCTGAACCTTTACCCCGTTGCcCGGCAACGGCCAGGTCTGTGCCAAGTGTTT g t a t aca c ta cc ta t t a c a c 1210 1220 1230 1240 1250 1260 1270 1280 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** * ** *** * * * ** * * * * * * * ** GCTGACGCAACCCCCACTGGCTGGGGCTTGGTCATGGGCCATCAGCGCATGCGTGGAACCTTTctGGCTCCTCTGCCGAT t t ct a tc t a aa gg 1290 1300 1310 1320 1330 1340 1350 1360 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| *** * ** * ** ** ** * ** ** *** ** * * ** * CCATACTGCGGAACTCCTAGCCGCTTGtTTTGCTCGCAGCAGGTCTGGAGCAAACATTcTCGGGACgGATAACTCTGTTG c a c c g g g ca t t c c a c a g 1370 1380 1390 1400 1410 1420 1430 1440 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** ** ** * ****** * * ** * ** * * * * * * * * TtCTCTCCCGCAAATATACATCgTTTCCATGGCTGCTAGGCTGTGCTGCCAACTGGATCCTGCGCGGGACGTCCTTTGTT c t t g t g a ac a a a c a c 1450 1460 1470 1480 1490 1500 1510 1520 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * **** ***** * *** ** * * ** * * * TACGTCCCGTCGGCGCTGAATCCcGCGGACGACCCtTCTCGGGGcCGCTTGGGaCTCTcTCGTCCCCTTCTCCGTCTGCC c a t g t tc a gactga t ca at c c g tg t c g 1530 1540 1550 1560 1570 1580 1590 1600 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * **** * * **** ** * *** ** ** * ** * ** * * ** GTTtCGaCCGACCACGGGGCGCACCTCTCTTTACGCGGACTCCCCGTCTGTGCCTTCTCATCTGCCGGACCGTGTGCACT c at a c t g c 1610 1620 1630 1640 1650 1660 1670 1680 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * *** * * ** ** * ** TCGCTTCACCTCTG---CAC---GTCGCAT------GGAGACCACCGTGAACGCCCA---------CC---aat---TC- g a a t g t gca ga cgg cg t 1690 1700 1710 1720 1730 1740 1750 1760 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * * * ** * * * * * * --------TTGCCCAAGGTCTTAcATAAGAGGACTCTTGGACTCTCTGtAATGTCAACGACCGACCTTGAGGCATACTTC c a a gt a a t aacg t ca c c 1770 1780 1790 1800 1810 1820 1830 1840 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| *** * * * * * ** ** * * *** * * AAAGACTGTTTGTTTAAaGACTGGGAGGAGTTGGGGGAGGAGatTAGaTTAAaGgTcTTTGTAcTAGGAGGCTGTAGGCA c c g a t c ccg g ct a g a t g ta t t 1850 1860 1870 1880 1890 1900 1910 1920 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * ** TAA--------------------------------------ATTGGTCTG-CGCACCAGCACCATGCAACTTTTTCACCT at -- -gtg att c t 1930 1940 1950 1960 1970 1980 1990 2000 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * * **** * * ** * ** ** CTGCCTAATCATCTCtTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTgGGgCATGGACATtG g ta c t a a c c 2010 2020 2030 2040 2050 2060 2070 2080 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * *** ** * * * * ** * * * AcCCTTATAAAGAATTTGGAGCTaCTGTGGAGTTACTCTCGTTTTTGCCTtCTGACTTCTTTCCTTCaGTACGAGATCTT tt g t c c a gac t t a g ca t t c g a t atg g c g a c t 2090 2100 2110 2120 2130 2140 2150 2160 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * * * * * * * CTaGATACCGCCTCAGCTCTgTATCGGGAaGCCTTAGAGTCTCCTGAGCATTGtTCACCTCAcCATACTGCACTCAGGCA t c ta t a t ac t a a t a gtca tga t g ta g c c t c 2170 2180 2190 2200 2210 2220 2230 2240 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * * * * ** ** ** * * AGCAATtCTtTGCTGGGGGGAacTAATGAcTCTAGCtACCTGGGTGGGtGgTAATTTGGAAGATCcAgcATCcAGgGACC tg c g t a ct t atact gt c aata ac c c a atg t a t ct a a g c cc t cg a c t g 2250 2260 2270 2280 2290 2300 2310 2320 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * ** ** * ** TAGTAGTcAGTTATGTcAACACTAATATGGGCCTAAAGTTCAGgCAACTaTTGTGGTTTCACATTTCTTGTCTCACTTTT a a t tgcc t ttaacccg a c t g a tc a t c a gc c t tg g a c t t a c 2330 2340 2350 2360 2370 2380 2390 2400 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * ** * ***** * * * ** ** **** GGAAGAGAAACgGTcaTAGAGTATTTGGTGTCTTTCGGAGTGTGGATTCGCACTCCTCCAGCTTATAGACCACCaAATGC cctgta tt t a t a agcga gat c c ac g t c a t g t 2410 2420 2430 2440 2450 2460 2470 2480 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * *** * * ** * * * ** * * ** * * ** ** ** CCCTATCtTATCAACACTTCCGGAGACTACTGTTgTTAGACGACGAG------GCAGGTCCCCTAGAAGAAGAACTCCCT c g a tg a ga a c a g g t c 2490 2500 2510 2520 2530 2540 2550 2560 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * ** * * * * * * * * ** CGCCTCGCAGACGAAGgTCTCAATCGCCGCGTCGCAGAAGATCTCAATCTCGGGAAt---CTCAATGTTAGTATTCCTTG a a a c a a a gcc ca c a c c 2570 2580 2590 2600 2610 2620 2630 2640 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * * ** * ** * * * ** GACTCATAAGGTGGGaAAcTTTACgGGGCTTTATTCTTCTACTGTaCCTGTCTTTAAcCCTCATTGGAAAACAC---CcT g c a g gt t t c c ct act a t aa c aa t a g t 2650 2660 2670 2680 2690 2700 2710 2720 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** * * * ** * ** * * CTTTTCCTAATATACATTTACACCAAGACATtATCAAAAAATGTGAACAaTTTGTAGGcCCACTCACAGTcAATGAgAAA c c t cc g t a t c tg c g g c t g t ta t a g t a 2730 2740 2750 2760 2770 2780 2790 2800 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** * * * ** ** * ** * * ** * aGAAGAcTGCAATTgATTATGCCTGCTAGGTTTTATCCAAAtGTTACCAAATATTTgCCATTgGATAAGGGTATTAAACC c gt aa a c c a c c t gtcc t a c a c c c aag t c 2810 2820 2830 2840 2850 2860 2870 2880 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** ** * ** * * * * ** * ** * * TTATTATCCAGAACATCTAGTTAATCATTACTTCCAAACcAGACAtTATTTACACACTCTATGGAAGGCGGGTaTATTAT c c c g ct g t g t c t t a g t g a g c a 2890 2900 2910 2920 2930 2940 2950 2960 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * * * *** * * ** **** ATAAGAGAGAAACAACACaTAGCGCCTCATTTTGTGGGTCACCATATTCTTGGGAACAAgAgCTACAGCATGGGGC---- c t t g t c a t a a ta gt 2970 2980 2990 3000 3010 3020 3030 3040 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** *** * * ** -----------------------------AGA------------ATCTTTCCACCAGCAATCCTCTGGGATTCTTTCCCG g g c 3050 3060 3070 3080 3090 3100 3110 3120 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * ** ** * * * * * * ***** * * * * * ACCACCAGTTGGATCCAGCCTTCAGAGCAAACACcGCAAATCCAGATTGGGACTTCAATCCCAACAAGGACACCTGGCCA t t c a tt aaac c t c t ttg a 3130 3140 3150 3160 3170 3180 3190 3200 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** * ** * * * * ** GACGCCAACAAGGTAGGAGCTGGAGCATTCGGGCTGGGaTTCACCCCACCgCACGGAGGCCTTTTGGGGTGGAGCCCTCA a t g g c a ca tc g a t gc a a g g t 3210 3220 3230 3240 3250 3260 3270 3280 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * GGCTCAGGGCATAcTACAAACcTTGCCAgCAAATCCGCCTCCTGCcTCtACCAATCGCCAGTCAGGAAGGCAGCCTACCC a a cga g c tg aa g a g tag c t aa ga gc a a c t t c t a c g a 3290 3300 3310 3320 ....:....|....:....|....:....|....:....|....:.... CgCTGTCTCCACCTTTGAGAaACACTCATCCTCAGGCCATGCAGTGGAA t a g gc c g t g c a a a a a c |
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