HBVdb

Dataset for nucleotide sequence PreS2 of genotype all

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
ATGCAGTGGA------AcTCCACaaCaTTCCACCAAgCTCTgCaa---GAtCCCAGAGTgAGgGgcCTgTAttTtCCTGC
gcaa a           t  a gcgac  t  t  ga c  tttg   a c  g ag  c aa ct  a  cc c     
                    t  tc t              a           a     a        t           
                          g                                                     

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
TGGTGGCTCCAGTTCaGGAACAGTaAaCCCTGtTCcGAcTAcTGcCTCtccCATaTCGTCAATCTtctCGAgGAcTGGGG
         a     c aggt cag g     c  aa ac t  t   aga tcc ta    c  cagt  a  t     
                       cc                       gtt                    c        
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
ACCCTGcaccGAACATGGAGAaCAtcaCATCAGGAtTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTCTTGTTG
g  t  tgat  ct     a g  cag        c    c        t    c           t  g  c  c    
       tt          c      t                                                     
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
ACAAgAATCCTCACAATACCaCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAG-GGGGAaCacCCgtGTGTC
    a               ga                              g            aggtta  ac     
                                                                  ct c    g     
                                                                   c g    a     

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
tTGGCCAAAA---TTCGCAGTCCCcAAcCTCCAaTCACTCACCAACCTctTGTCCTCCAAtTTGTCCTGGtTATCGCTGG
c              t        a  t     g     t  t   t gc        g cc        c     t   
g                                                                     a         
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                           *                                                    
ATGTGTCTGCGGCGTTTTATCATcTTCCTCTtCATCCTGC---TGCTATGCCTCATCTTCTTgTTGGTTCTTCTGGAcTA
    a                  a     t g                              a         g    t g
                                                                                
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
tCAAGGTATGTTGCCCGTTTGTCCTCTAaTTCCA------G------GAt---Ca------t------CAACc-------
c  g              c        gc                    a    t      a       g  a       
                  g        c                          c                 t       
                                                      g                 g       

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--ACCAGcACgGGACCaTGCAaaACCTGCACgAcTCCTGCTCAAGGaAcCTCTATGTtTCCCTCaTGTTGCTGTACaAAA
    a  tgtc  ga c   cgg       tagtaat  t      c a     c  a      t  c  t   ttc   
                                 g                              c               
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                *               
CCTtCGGAcGGAAAcTGCACcTGTATTCCCATCCCATCaTCtTGGGCTTTCGcAAaATtCCTATGGGAGTGGGCCTCAGt
  ca    ta    t     t                 g  c        a g  g  a                    c
                                         a          t                           
                                                                                

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                     *                                          
CCGTTTCTCcTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGTAGGGCTTTCCCCCACTGTtTGGCTTTCAGtTA
         t                c  a              g  cc             t   c       t  c  
         a                                                                      
                                                                                

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
TATGGATGATGTGGTaTTGGGGGCCAAGTCTGTACAaCATCtTGAGTCCCTTTaTaCCgCTgTTACCAATTTTCTTTTGT
 g t      c    tc       g  aa    g cg  c g   ag      t g  t  a     c       gc a 
          a                                                                     
                                                                                

       890        
....:....|....:...
                  
CTtTGGGTATACATTTaA
  c    c  c   c g 
  g               
                  
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