HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence PreS2 of genotype all

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

ATGCAGTGG---AAcT---CCACaaCaTTCCACCAAgCTCTgC---aaGAtCCCAGAGTgAGgGgcCTgTAttTtCCTGC
gca  a        t     a gcgac  t  t  ga c  tt   tga c  g ag  ccaa ct  a  cc c
                    t  tc t              a           a     a        t
                          g                                         c

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

TGGTGGCTCCAGTTCaGGAACAGTaAaCCCTGtTCcGAcTAcTGcCTCtccCATaTCGTCAATCTtctCGAgGAcTGGGG
         a     c aggt cag g     c  aa ac t  t   aga tcc  a    c  cagt  a  t
                       cc                       gtt                    c


       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

ACCCTGcaccGAAcATGGAGAaCAtcaCATCAGGAtTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTCTTGTTG
g  t  tgat   t     a g  cag        c    c        t    c           t  g  c  c
       tt          c      t


       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

ACAAgAATCCTCACAATACCaCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAaCacCCgtGTGTCt
    a               ga                              g           aggtta  ac     c
                                                                 ct c    g     g
                                                                  c      a

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

TGGCCAAAA---TTCGCAGTCCCcAAcCTCCAaTCACTCACCAACCTctTGTCCTCCAAtTTGTCCTGGtTATCGCTGGA
              t        a  t     g     t  t   t gc        g c         c     t
                                                                     a


       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

TGTGTCTGCGGCGTTTTATCATcTTCCTCTtCATCCTGC---TGCTATGCCTCATCTTCTTgTTGGTTCTTCTGGAcTAt
   a                  a     t g                              a         g    t gc



       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

CAAGGTATGTTGCCCGTTTGTCCTCTAaTTCCAG------GAt------CatCA---AC------cACCA---------G
  g              c        gc              a       ta g           a  a
                 g        c                       c              t
                                                                 g

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

cACgGGACCaTGCAaaACCTGCACgAcTCCTGCTCAAGGaAcCTCTATGTtTCCCTCaTGTTGCTGTACaAAACCTtCGG
tgtc  ga c   cgg       tagtaat  t      c a    t   a      t  c  t   t c     cat
                                                         c


       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

AcGGAAAtTGCACcTGTATTCCCATCCCATCaTCtTGGGCTTTCGcAAaATtCCTATGGGAGTGGGCCTCAGtCCGTTTC
ta    c     t                 g  c        a g  g  a                    c
                                  a          t


       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                              *
TCcTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGTAGGGCTTTCCCCCACTGTtTGGCTTTCAGtTATATGGAT
  t                c  a              g  cc             t   c       t  c   g t
  a


       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

GATGTGGTaTTGGGGGCCAAGTCTGTACAaCATCTTGAgTCCCTTTtTaCCgCTgTTACCAATTTTCTTTTGTCTtTGGG
   c    tc       g  aa    g cg  c g   ag      a g  t  a     c       gc a   c
   a                                                                       g


       890
....:....|.

TATACATTTaA
c  c   c g