Dataset for nucleotide sequence Genomes of genotype all
[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]
10 20 30 40 50 60 70 80 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** cTCCACaaCaTTCCACCAAgCTCTg---CaaGATCCCAGaGTgAGgGgcCTgTAttTtCCTGCTGGTGGCTCCAGTTCaG t a gcgac t t ga c t ttg c g ag ccaa ct a cc c a c t tc t a a a t g c 90 100 110 120 130 140 150 160 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * GAACAGTaAaCCCTGtTCcGAcTAcTGcCTCtccCATaTCGTCAATCTtcTCGAgGAcTGGGGACCCTGcaccGAACATG ag t cag g c aa ac t t aga tcc ta c cagt a t g t tgat t cc gtt c tta 170 180 190 200 210 220 230 240 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| GAGAaCAtcaCATCAGGAtTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAgAATCCTCACAAT a g cag c t c t g c a c t 250 260 270 280 290 300 310 320 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ACCaCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAaCacCCgtGTGTCtTGGCCAAAATTCGCAGT ga g aggtta ac c t ct c g g c a 330 340 350 360 370 380 390 400 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * CCCcAAcCTCCAaTCACTCACCAACCTctTGTCCTCCAAtTTGTCCTGGtTATCGCTGGATGTGTCTGCGGCGTTTTATC a t g t t t gc g c c t a a 410 420 430 440 450 460 470 480 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** * * ATcTTCCTCTtCATCCTGCT---GCTATGCCTCATCTTCTTgTTGGTTCTTCTGGAcTAtCAAGGTATGTTGCCCGTTTG a t g c a g t gc gg c g 490 500 510 520 530 540 550 560 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| TCCTCTAaTTCCAGG------At------CatCAA---Cc------------AC------------CA------------ cc a ta g t a g c a g g 570 580 590 600 610 620 630 640 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * GcACgGGACCaTGCAaaACCTGCACgAcTCCTGCTCAAGGaAcCTCTATGTtTCCCTCaTGTTGCTGTACaAAACCTtCG tgtc g c cgg ta taat t c a c a t c t t c cat a g c 650 660 670 680 690 700 710 720 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * * * GAcGGAAAtTGCACcTGTATTCCCATCCCATCATCcTGGGCTTTCGcAAaATtCCTATGGGAGTGGGCCTCAGtCCGTTT ta c t g t a g g a c a t 730 740 750 760 770 780 790 800 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ** CTCcTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGTAGGGCTTTCCCCCACTGTtTGGCTTTCAGtTATATGGA t c a g cc t c t c g t a 810 820 830 840 850 860 870 880 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * ** TGATGTGGTaTTGGGGGCCAAGTCTGTACAaCATCTTGAGTCCCTTTtTaCCgCTgTTACCAATTTTCTTTTGTCTtTGG c tc g aa g cg c g ag a g t a c gc a c a g 890 900 910 920 930 940 950 960 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| **** GTATACATTTaAAcCCtaAcAAAACaAAaaGaTGGGGtTAcTCccTtaAcTTcATGGGaTATgTaATTGGaaGTTggGGt c c c g ta ccct g c gc t c taatt ac t t t ca c gt c at g t g t g a g c t cg c g g c c g t a 970 980 990 1000 1010 1020 1030 1040 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * aCaTTgCCaCAgGAaCAtATtgTAcaaAAAaTCAAacaaTGTTTTaGaAAACTtCCTgTaAAcaGgCCTATTGATTGGAA t tc a g a ct c caggttg gc g ggtc c cc g t g cact tc a ag c g c c c a a c t t a g t c c t c g t g t t t c c 1050 1060 1070 1080 1090 1100 1110 1120 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * AGTaTGTCAacGaATTGTGGGTCTTtTGGGcTTTGCtGCcCCtTTtACaCAATGTGGtTAtCCtGCtTTaATGCCtTTaT g c c ga t a a a gc a t c c t a c g a c a cc gca cc g g c g g a c t c c a c t g c a c g g 1130 1140 1150 1160 1170 1180 1190 1200 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ATGCaTGTATaCAAgCtAAgCAGGCTTTcACTTTCTCGCCAACTTACAAGGCCTTTCTgtGTAAACAaTAtcTGAACCTT ca c c tactt acga a tgtc t g t aa t ct aaacccc g ca cc g c g g a cc t c c 1210 1220 1230 1240 1250 1260 1270 1280 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * TACCCCGTTGCcCGGCAACGGcCaGGTCTgTGCCAAGTGTTTGCTGACGCAACCCCCACTGGcTGGGGCTTGGccATaGG ta t t c c t t ttc g c a g c t a a t g a g c 1290 1300 1310 1320 1330 1340 1350 1360 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * CCATCaGCGCATGCGTGGAACCTTTgTGgCTCCTCTGCCGATCCATACTGCGGAACTCCTAGCcGCTTGTTTTGCTCGCA c gc c c g cc t gt a c t a c c c ta g g t ag g 1370 1380 1390 1400 1410 1420 1430 1440 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * * GCcGGTCTGGaGCaAAacTtaTCGGgACtGAcAAcTCTGTtGTcCTcTCcCGgAAaTAtACaTCcTTTCCATGGCTGCTa a g g cca cc t a c t t c c t tg ta c g c c g ac c gg a c g g g a g a a t t a a t t 1450 1460 1470 1480 1490 1500 1510 1520 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * GGcTGTgCTGCCAACTGGATCCTgCGCGGGACGTCCTTTGTtTACGTCCCGTCGGCGCTGAATCCcGCGGACGACCCcTC g a t t a a c c a a t t g t a a a t a a 1530 1540 1550 1560 1570 1580 1590 1600 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| tCGGGGcCGcTTGGGaCTCTacCGtCCcCTTCTcCgtCTGccGTtcCggCCGACCACGGGGCGCACCTCTCTTTACGCGG c c t tc ga g ct c g c ttac att at aa at g t g a cg t g t g cg t c t t a 1610 1620 1630 1640 1650 1660 1670 1680 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ** tCTCCCCGTCTGTGCCTTCTCATCTGCCGGaCCGTGTGCACTTCGCTTCACCTCTGCAC---GTcGCAT------GGAgA a t g ca t t ca c c g 1690 1700 1710 1720 1730 1740 1750 1760 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| CCACCGTGAACGC------CC---------acc---------a------------gatC--------------------- a tt gta g agaa a cat t ctgt g cg 1770 1780 1790 1800 1810 1820 1830 1840 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| t---------TGCC---------------CAAGGTCTTaCATAAGAGGACTCTTGGACTctCaGcAAT---GTCAACGAC c a ca g gt ac a tcttatgcg ta t g g gc c c 1850 1860 1870 1880 1890 1900 1910 1920 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ------------CGACCTTGAGGCaTACTTCAAAGACTGTgTgTTTAaaGAcTGGGAGGAGtTGGGGGAGGAGatTAGgT tgga c a ac a t a cgcg g acca gcc ac g t cag tg 1930 1940 1950 1960 1970 1980 1990 2000 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| TAAaGgTCT---TTGTAcTAGGAGGCTGTAGGCATA---AATTGGTcTGttCACCAGCACCATGCAACTTTTTCACc--- g t a t a t g g gc cgt t t - t g 2010 2020 2030 2040 2050 2060 2070 2080 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ------------------------------------------------------TCTGCCTAATCATCTCaTGTTCATGT c g tt a 2090 2100 2110 2120 2130 2140 2150 2160 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| CCtACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTgGGgCATGG------------------------------- t c t a a a 2170 2180 2190 2200 2210 2220 2230 2240 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * -----ACATTGACCCgTATAAAGAATTTGGAGCTtCTGTGGAGTTACTCTCtT---TT------TTGCCTTCTGACTTCT c taat aa c c a g g gac t t a a a g c c 2250 2260 2270 2280 2290 2300 2310 2320 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| TTCCtTCtaTtcGaGATCTcCTcGAcACCGCCTCtGCTCTgTATCGGGAgGCCTTAGAGTCTCCgGAaCATTGtTCACCT ac ga ag aa g c t a t a ta a ct actca a a tc a at t g ca cgac a c c t a t t ag c c t a a tt g g g g 2330 2340 2350 2360 2370 2380 2390 2400 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * CACCATACaGCACTcAGGCAAGCtATTcTgTGtTGGGGtGAgtTgATGAaTcTaGCcACCTGGGTGGGaagTAATTTGGA a t c t ta a ag ct t c tg ac a tcct g tt t tgaa c ac g c ag c a c a c tc c a t c 2410 2420 2430 2440 2450 2460 2470 2480 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * AGAtCCAgCATCcAGGGAatTAGTAGTcAgcTATGTcAAtgtTAAtATGGGCcTAAAaaTcAGaCAAcTatTGTGGTTTC c c atattg tc a cccga g agat t cac c cg tt g gt t g t cc a c g g a tga t t aa c a g t t 2490 2500 2510 2520 2530 2540 2550 2560 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * AcATTTCcTGtCTtACTTTTGGaAGAGAaACtGTtcTtGAgTATTTGGTgTCTTTtGGAGTGTGGATTCGCACTCCTcCa tg a t ca c tc g a c ggtg ca a a c c c c g c a caat c g t a at c a a tc c c g 2570 2580 2590 2600 2610 2620 2630 2640 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * GCtTAtAGACCACCAAATGCCCCTATCTTATCAACACTTCCGGAaACTACTGTTGTTAGACGA------c---------- c a c g tat c c g g a tg a ga a g c g c 2650 2660 2670 2680 2690 2700 2710 2720 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| --------GA------G------GCAG------GTCCCCTAGAAGAAGAACTCCCTCGCCTCGCAGACGAAGgTCTCAAT ggacc t a c c a c c a a c 2730 2740 2750 2760 2770 2780 2790 2800 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| CGCCGCGTCGCAGAAGATCTCAATCTCGGGaA---T---CtCAATGTTAGTATtCCTTGGACtCATAAGGTGGGAAAcTT a c a a ca ct c c a c c a c a g t gc a g g 2810 2820 2830 2840 2850 2860 2870 2880 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * TACgGGGCTTTATTCtTCTACtGTaCCTgtCTTTAAtCCTgAaTGGcAAACt---CCcTCtTTTCCTaAcATtCATTTac c t a c c c ct gact agt c ct cct at a t c ag t a c ga t a c tc a g t c a cc g c g a c a 2890 2900 2910 2920 2930 2940 2950 2960 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * AggAgGAcATTaTtaAtAgaTGTcAaCAATtTGTgGGcCCtCTtACaGTaAATGAaAAaaGgAGAtTaaAATTaATtATG cc aa tc cgccgca ag cg g g ac a g c c taat c gttcc a gc gc cc gg c a t g ac c a a a a c cc cg g a t t t g g 2970 2980 2990 3000 3010 3020 3030 3040 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * CCTGCTAGgTTtTATCCtAaccttACcAAATATTTgCCctTaGAtAAaGGcATtAAACCtTATTATCCaGAacAtgtAGT at c a c tc c ctgac t g cc a ac g c g t c g c c t gt gccg c a tgtg g t ta g g a a g ta ca aac a a a c c at 3050 3060 3070 3080 3090 3100 3110 3120 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * TAATCATTACTTCcAaACtaGaCAtTATTTACAtACTCTgTGGAAGGCgGGtATttTATATAAgAGaGAaaCtACACgtA t ta gg cc g c g c ct t a t cg cc ac g gt ct t ac g a a g a a c a a g 3130 3140 3150 3160 3170 3180 3190 3200 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| GCGCcTCATTTTGtGGGTCACCATATTCTTGGGAACAAGAgCTACAgc------------------a------------- t a c tc a t c ca ta t- -tgggaggttggtc t 3210 3220 3230 3240 3250 3260 3270 3280 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ----------------------aa------------------a------------------c------------------ ttcc tgggaggttggtcttcc--gggaggttggtcttcaaa-ggagcacctctatcaacg- c c ta a t g g a 3290 3300 3310 3320 3330 3340 3350 3360 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| c------------------t---------------c---------------g---------------a------------ -agcacctctctcaacgac- - -ttcttggacggtccc- g g a t c a t g 3370 3380 3390 3400 3410 3420 3430 3440 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ---a---------------a-a--------------gg---------------C-A-TGGGGacgAATCTTTCtgtcccC c - - -- a t g acaa c ac cactaga - g c a - - g g g t g a 3450 3460 3470 3480 3490 3500 3510 3520 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * * AAtCCtCTGGGATTCTTtCCCGAtCAcCAGTTGGAcCCtGCaTTCagAGCcAActCaaacAATCCAGATTGGGACtTCAA c c tc c a gc t c t actg gag a ta cgca g c c tca a g g c g g t 3530 3540 3550 3560 3570 3580 3590 3600 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| cCCcaaCAAGGAccacTGGCCaGacGCcAAcaAGGTaGGAG---tgGGAGCATTCGGGCcaGGgTTCACcCCaCCaCAcG taagct a tact a gacgt acgtc g ct tgc at t tg ac tt t c t at ga tcta t g a t a t t a c g t c g t 3610 3620 3630 3640 3650 3660 3670 3680 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| GcgGt------------cTtTTGGGGTGGAGCCCTCAGGCTCAGGGCaTatTgacaACagTGCCAg-------------- aaac a gc t g a a a tccgc acact tt at ac g a g a g ta cg t c - t t t g 3690 3700 3710 3720 3730 3740 3750 3760 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ----------cAgctCCtCCTCCTGCCTCcACCAATCGgCAGTCAGGAAGgCAGCCTACtCCcaTcTCTCCACCTcTaAG gtgaaa g t t c g gtc gc aa a a c gc ga t gc - tg a a t a c at a tg t 3770 3780 3790 ....:....|....:....|....:....|....:.. ------agACAcTCATCCTCAGGCCATGC-AGTGGAA ga ga a a agca a g c |