HBVdb

Dataset for nucleotide sequence Genomes of genotype all

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                **              
cTCCACaaCaTTCCACCAAgCTCTgCaa---GAtCCCAGAGTgAGgGgcCTgTAttTtCCTGCTGGTGGCTCCAGTTCaG
t  a gcgac  t  t  ga c  tttg     c  g ag  c aa ct  a  cc c              a     c 
   t  tc t           g  a           a     a        t                            
         g                                                                      
                                                                                

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
           *                                                        *           
GAACAGTaAaCCCTGtTCcGAcTAcTGcCTCtccCATaTCGTCAATCTtcTCGAgGAcTGGGGACCCTGcaccGAACATG
aggt cag g     c  aa ac t  t   aga tcc ta    c  cagt  a  t     g  t  tgat   t   
      cc                       gtt                    c               tt        
                                                                                
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                             *           *                      
GAGAaCAtcaCATCAGGAtTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAgAATCCTCACAAT
  a g  cag        c    c        t    ca          t  g     c        a            
  c      t                                                                      
                                                                                
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                        *        *  *                          *         *  *   
ACCaCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAaCacCCgtGTGTCtTGGCCAAAATTCGCAGT
   ga                              g           aggtta  ac     c               
                                                ct c    g     g                 
                                                 c      a                       
                                                                                

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  *        *  *               *    *     *     *     *             *  *         
CCCcAAcCTCCAaTCACTCACCAACCTctTGTCCTCCAAtTTGTCCTGGtTATCGCTGGATGTGTCTGCGGCGTTTTATC
   a  t         t  t   t gc        g cc        c     t       a                
                                                 a                              
                                                                                
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
      *    *                                         **                    *    
ATcTTCCTCTtCATCCTGC---TGCTATGCCTCATCTTCTTgTTGGTTCTTCTGGAcTAtCAAGGTATGTTGCCCGTTTG
  a     t g                              a         g    t gc  g              c  
                                                                             g  
                                                                                
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
TCCTCTAaTTCCA------G------GAt---C------------at------------CA------------ACc----
      cc                    a                ta             g              t    
      g                                      c                             a    
                                             g                             g    
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                 *  *           
-----ACCAGcACgGGACCaTGCAaaACCTGCACgAcTCCTGCTCAAGGaAcCTCTATGTtTCCCTCaTGTTGCTGTACa
       a  tgtc  g  c   cgg       tagtaat  t  g   c a     c  a      t  c  t   t c
             a     t                g                              c            
                                                                                
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                    **             *    *        * **           
AAACCTtCGGAcGGAAAcTGCACcTGTATTCCCATCCCATCATCcTGGGCTTTCGcAAaATtCCTATGGGAGTGGGCCTC
     ca    ta    t     t                 g  t        a g  g  a                  
                                            a          t                        
                                                                                
                                                                                

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*  *     *                              *                               *       
AGtCCGTTTCTCcTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGTAGGGCTTTCCCCCACTGTtTGGCTTTCAG
  c         t                c  a              g  cc             t   c       t  
            a                                                                   
                                                                                
                                                                                

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
       **       *     **                                                        
tTATATGGATGATGTGGTaTTGGGGGCCAAGTCTGTACAaCATCTTGAGTCCCTTTtTaCCgCTgTTACCAATTTTCTTT
c   g t      c    tc       g  aa    g  g  c g   ag      a g  t  a     c       gc
             a                                                                  
                                                                                
                                                                                

       890       900       910       920       930       940       950       960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                          ****  *                               
TGTCTtTGGGTATACATTTaAAcCCtaAcAAAACaAAaaGaTGGGGtTAcTCccTtaAcTTcATGGGaTATgTaATTGGa
 a   c    c  c   c g  ta ccct  g  c  gc t      taatt ac t  t     t  ca c     g
     g                   at g     t     g            g           c     t     c
                          g       g     c              c           g     g     t
                                                                                

       970       980       990      1000      1010      1020      1030      1040
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                         *                                       *              
aGTTggGGtaCaT-TgCCaCAgGAaCAtATtgTAcaaAAAaTCAAacaaTGTTTTaGaAAACTtCCTGTaAAcaGgCCTA
t c at  ct t   a  g  a  t  c  caggttg  gc g  ggtg  c  cc g   t g   a t  tc a  ag
g       gg c      c     c       c acc   t t   a c        t     c     c     t  c 
        a  g      t     g          gt         t t        c                 c    
                                                                                

      1050      1060      1070      1080      1090      1100      1110      1120
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
      *                               *                        *                
TTGATTGGAAAGTaTGTCAacGaATTGTGGGTCTTTTGGGcTTTGCtGCcCCtTTtACaCAATGTGGtTAtCCTGCtTTa
    c     g  c  c  ga t  a ca  a  gc a  g  c  c  t  a  c  g        a  c  a  cc g
             g        c        g  c     t        a  c     t        c     c  a  c
             t        g        c        a                 c        g        g   
                                                                                

      1130      1140      1150      1160      1170      1180      1190      1200
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
       *                                                                        
ATGCCtTTaTATGCaTGTATaCAAgCtAAgCAGGCTTTcACTTTCTCGCCAACTTACAAGGCCTTTCTgtGTAAACAaTA
 a   cc g  ca c  c  tactt a ga  a     tgtc  t        g  t  aa t  ct aaacccc  g  
              g     c  g  g                                         cc          
                       c  c                                                     
                                                                                

      1210      1220      1230      1240      1250      1260      1270      1280
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                        *                       * *        *    
tcTGAACCTTTACCCCGTTGCcCGGCAACGGcCaGGTCTgTGCCAAGTGTTTGCTGACGCAACCCCCACTGGcTGGGGCT
ca  cc               ta        t t  c  c                 t     t        t       
 t                   a         g c     t                                a       
                     g                 a                                        
                                                                                

      1290      1300      1310      1320      1330      1340      1350      1360
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                              * 
TGGccATaGGCCATCagCGCATGCGTGGAACCTTTgTGgCTCCTCTGCCGATCCATACTGCGGAACTCCTAGCcGCTTGT
   ttc t     c gc   c    c  g      cc t     t a           c           t  a  c  c
    a  g                           ta                     g           g  t      
    g  c                           ag                                    g      
                                                                                

      1370      1380      1390      1400      1410      1420      1430      1440
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                           *                          *  *    * 
TTTGCTCGCAGCcGGTCTGGaGCaAAacTtaTCGGgACtGAcAAcTCTGTtGTcCTcTCcCGgAAaTAtACaTCcTTTCC
  c         a       g  g cca cc a  a  c  t  t  c  c  g  t  ta c  g  c   g ac  
                          gg g  t  c  g        g     t  a  g  a           a     
                          t        t  a              a                    t     
                                                                                

      1450      1460      1470      1480      1490      1500      1510      1520
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *                       *                                           * *      
ATGGCTGCTaGGcTGTgCTGCCAACTGGATCCTgCGCGGGACGTCCTTTGTtTACGTCCCGTCGGCGCTGAATCCcGCGG
         c  g   a             t  t  a  a           c           a  a        t    
            t                    a                                         a    
            a                                                                   
                                                                                

      1530      1540      1550      1560      1570      1580      1590      1600
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
ACGACCCcTCtCGGGGcCGcTTGGGaCTCTacCGtCCcCTTCTcCgtCTGccGTtcCggCCGACCACGGGGCGCACCTCT
    t  g  c  c  t  tc    ga g ct  c  g  c  ttac  att  at aa  at g     t         
       t  g  a           cg t g      t     g t   cg       t   c                 
       a                 t    t            a                                    
                                                                                

      1610      1620      1630      1640      1650      1660      1670      1680
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
CTTTACGCGGtCTCCCCGTCTGTGCCTTCTCATCTGCCGGaCCGTGTGCACTTCGCTTCACCTCTG---CACGTc-----
          a            t       g  ca    t                                 t     
          c                             c                                       
                                        g                                       
                                                                                

      1690      1700      1710      1720      1730      1740      1750      1760
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     **                                                                         
-GCATGGAgACCACCGTGA---------ACGCCCac------ca---------------g--Ct------------TGCC
       ca                     a  tgt      ag   a   at      -gtac                
                                  ca      gt   g   tg      aaat                 
                                          t    c   ga        cg                 
                                                   c                            

      1770      1780      1790      1800      1810      1820      1830      1840
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
CAAGG------------------------TCTTaCATAAGAGGACTCTTGGACTctCaGcA------------ATGTCAA
a cac                            gt    ac     a       tcttatg            cg     
t                                                     gg g gc                   
                                                         c                      
                                                                                

      1850      1860      1870      1880      1890      1900      1910      1920
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
CGACCGACCTTGAGGCaTACTTCAAAGACTGTgTgTTTAaaGAcTGGGAGGAGtTGGGGGAGGAGatTAGgTTAAaGgT-
ta   tgga c  a ac   a           t a  c cg  g        acca         gcc  ac g t a  
 c              g                       t                        cag         t  
                t                                                tg             
                                                                                

      1930      1940      1950      1960      1970      1980      1990      2000
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-C---TTTGTAcTAGGAGGCTGTAGGCA---TAAATTGGTcTGttCACCAGCACCATGCAA-------------------
 t    a    t g                 g        gc cgt    t  t                          
 g                                                                              
                                                                                
                                                                                

      2010      2020      2030      2040      2050      2060      2070      2080
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------CTTTTTCAC---------CTCTGCCTAATCATCTCaTGTTCA
                                                                 g      tt   a  
                                                                                
                                                                                
                                                                                

      2090      2100      2110      2120      2130      2140      2150      2160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
TGTCCtACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTgGGgCATG-----------------------------
     c   t                         a       a  a                                 
                                                                                
                                                                                
                                                                                

      2170      2180      2190      2200      2210      2220      2230      2240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                *                                               
-------GACATTGACCCgTATAAAGAATTTGGAGCTtCTGTGGAGTTACTCTC------tTTTTTGCCTTCTGACTTCT
            c  taat                 aa c c   a  g           g         g c  t  t 
                  a                    a                    a         a         
                  c                                                   c         
                                                                                

      2250      2260      2270      2280      2290      2300      2310      2320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
TTCCtTCtaTtcGaGATCTcCTcGAcACCGCCTCtGCTCTgTATCGGGAgGCCTTAGAGTCTCCgGAaCATTGtTCACCT
ac  ga ag aa g  c  t  a  t  a  tg a  ct actca a  a  tc    a  at t  g     ca cgac
    a  c  c  t     a  t     t  aa c     c        t  a           a           t  g
       g  g        g                    t                                   g   
                                                                                

      2330      2340      2350      2360      2370      2380      2390      2400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                               *                              *                 
CACCATACaGCACTCAGGCAAGCtATTcTgTGtTGGGGtGAgtTgATGAaTCTaGCcACCTGGGTGGGaagTAATTTGGA
a t  c  t  ta a        cg ct t  c    tg  ac a    cct g  tt t        tgaa  c  ac 
        g              a  ag c        a  c              a           c tc        
        c                    a           t                            c         
                                                                                

      2410      2420      2430      2440      2450      2460      2470      2480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                            *   
AGAtCCAGCATCcAGGGAatTAGTAGTcAgcTATGTcAAtgtT-AAtATGGGccTAAAaaTcAGaCAAcTAtTGTGGTTT
c  c atattg tc a  cccga g  agat     t  cac  c cg    tt g  gt t  g   t cc a     c
g     g     a     tg    t  t                        aa     c        a g         
t                                                                     t         
                                                                                

      2490      2500      2510      2520      2530      2540      2550      2560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                *  *            
CAcATTTCcTGtCTtACTTTTGGaAGAGAaACtGTtcTtGAgTATTTGGTgTCTTTtGGAGTGTGGATTCGCACTCCTcC
  tg a  t  ca c tc     g   c ggtg  ca a  a        c  c  c  g              a  caa
     c           g           t  a  at c           a                          a t
                             c  c  gg                                           
                                                                                

      2570      2580      2590      2600      2610      2620      2630      2640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                 *              *                    *                          
tGCtTAtAGACCACCAAATGCCCCTATCTTATCAACACTTCCGGAaACTACTGTTGTTAG------A------C------
ac a  c      tat            c    c  g        g a tg    a                 g      
c  c                                             g                              
                                                                                
                                                                                

      2650      2660      2670      2680      2690      2700      2710      2720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
G------A------c------G---AG------GCAGGTCCCCTAGAAGAAGAACTCCCTCGCCTCGCAGACGAAGgTCT
a       cgggaca           t           a     c                a      c    c  a   
          a               c                                                     
                                                                                
                                                                                

      2730      2740      2750      2760      2770      2780      2790      2800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
       *                                                                        
CAATCGCCGCGTCGCAGAAGATCTCAATCTCGGG---a---ATCtCAATGTTAGTATtCCTTGGACtCATAAGGTGGGAA
     a         c        a      ca    c   tc c        a   c  c     a  c        g 
                                     g                   a  g     g             
                                                                                
                                                                                

      2810      2820      2830      2840      2850      2860      2870      2880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
         *     *                                                    *           
AcTTTACgGGGCTTTATTCtTCTACtGTaCCTgtCTTTAAtCCTgAaTGGcAAA---CtCCcTCtTTTCCTaAcATtCAT
 t  c  t  a  c  c  c  c  gact   tgt  c  ct  acg   at      a  t  c     ag t  a  c
          t              a  c   ac          c t   t       c  a        cc g  c   
                            g    a            c                       g  a      
                                                                                

      2890      2900      2910      2920      2930      2940      2950      2960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                        *                                       
TTaCAggAgGAcATTaTtaAtAgaTGTcAaCAATtTGTgGGcCCtCTtACaGTaAATGAaAAaaGgAGAtTaaAATTaAT
  gagcc aa tc cgccgca ag  cg g  g ac  a  g  c  c  taat  c  gttcc ac gc gc cc gg 
     a      t g  ac c      a             t  a  a  c cc       cg           g     
     t            t                      a  g        g                          
                                                                                

      2970      2980      2990      3000      3010      3020      3030      3040
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                   *                             *              
tATGCCTGCTAGgTTtTATCCtAaccttACcAAATATTTgCCctTaGAtAAaGGcATtAAACCtTATTATCCaGAacAtg
c     at c  a  c tc  c ctgac  t  g  cc a  ac g  c  g  t  c     g  c     t  gt gc
a     c              a tgtc   g        t  ta    g     g  a     a        g  ta ca
      g                 aag   a                 a     a        c        c     at
                                                                                

      3050      3060      3070      3080      3090      3100      3110      3120
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                             *                                  
tAGTTAATCATTACTTCcAaACtaGaCAtTATTTACAtACTCTtTGGAAGGCgGGtATttTATATAAgAGaGAaaCtACA
cg   g       t  ta gg cc g  c     g  c  ct g     a  t  cg cc       ac g  gt c  t
                      g                    a        a  g  a                 a  c
                      a                                a                       g
                                                                                

      3130      3140      3150      3160      3170      3180      3190      3200
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                               *                                
CgtAGCGCcTCATTTTGtGGGTCACCATATTCTTGGGAACAAGAgCTACA---------------gCATGGga-------
 ac  t  a     c tc        t     c        ca t                    t   ----       
        t       a                                                       g       
                                                                                
                                                                                

      3210      3220      3230      3240      3250      3260      3270      3280
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
ggttggtcttccaaacctcgaaaaGGC---------------------------------AtggggacgAATCTTT----
---------------------c--t -                                 --------a  c ac     
ctacctctaa agcca aatc-gg                                         aca      g     
 c    agg  g tg     gg                                                          
        c                                                                       

      3290      3300      3310      3320      3330      3340      3350      3360
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                     *            *                             
--------------------------CtgtcccCAAtCCtCTGGGATTCTTtCCCGAtCAcCAGTTGGAcCCtGCaTTCa
                           cactaga  c  c        tc c  a gc  t   c    t  actg   g
                           g  g        a                                g  c    
                              a                                            t    
                                                                                

      3370      3380      3390      3400      3410      3420      3430      3440
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                         *                                                      
gAGCcAActCaaacAATCCAGATTGGGACtTCAAcCCcaaCAAGGAccacTGGCCagacGCcAAcaAGGTaGGA---Gtg
ag  a  ta cgca g   c  c     tca   taagct   a  tact   a gacgt acgtc    g       ct
            g                        a          ga      cta     g               
                                                          t                     
                                                                                

      3450      3460      3470      3480      3490      3500      3510      3520
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
GGAGCATTCGGGCcaGGgTTCACcCCaCCaCAcGGcGG------------tcTtTTGGGGTGGAGCCCTCAGGCTCAGGG
   tgc at  t tg  ac   tt  t  c  t  aaa            ca gc          t  g  a  a  a  
     t     a  t  t     a  c  g     g              ag                a           
           c              g  t     t               t                            
                                                                                

      3530      3540      3550      3560      3570      3580      3590      3600
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
CaTatTgacaA------------------------CagTGCCAgcAgctCCtCCTCCTGCCTCcACCAATCGgCAGTCAG
tccgc acact                         tt at  at aaa  g        t  t        c g gtc 
 g ta cg t                          c          tg  a        a           t   a   
      t                             g                                           
                                                                                

      3610      3620      3630      3640      3650      3660      3670      3680
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
GAAGgCAGCCTACtCCcaTcTCTCCACCTcTaAG------agACAcTCATCCT------CAGGCCAT--G---CAGT--G
 gc aa a  a  c  gc aa        t g        ga   ga     a        a  agc  a     a    
          c     at g                          g                                 
                tg t                                                            
                                                                                

       
....:..
       
GAA----
       
       
       
       
© 1998-2020Legal notice