HBVdb

Dataset for nucleotide sequence Genomes of genotype all

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--cTCCAcaaCaTTCC----ACCAAgCTCTgCaa---GAtCCCAGaGTgAGgGgcCTgTAttTtCCTGCTGGTGGCTCCA
  t  a gcgac  t      t  ga c  tttg     c--g-ag--c--a-ct--a--cc-c              a 
     t atc t                  a        -  a --  aca- --  -  --                  
           g                              -     -        c                      
                                                         t                      

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                 *                                                              
GTTCaGGAACAGTaAaCCCTGtTCcGAcTAcTGcCTCtccCATaTCGTCAATCTtcTCGAgGAcTGGGGACCCTGcaccG
    c aggt cag g     c  aa ac t  t   aga tcc ta    c  cagt  a  t     g  t  tgat 
            cc                       gtt                    c               tta 
                                                                                
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
AAcATGGAGAaCAtcaCATCAGGAtTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAgAATCCT
  t     a g  cag        c    c        t    ca          t  g     c        a      
        c      t                                                                
                                                                                
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                     *          
CACAATACCaCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAaCacCCgtGTGTCtTGGCCAAAATT
         ga                              g           aggtta  ac     c           
                                                      ct c    g     g           
                                                       c g    a                 
                                                                                

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                           *                    
cGCAGTCCCcAAcCTCCAaTCACTCACCAACCTctTGTCCTCCAAtTTGTCCTGGtTATCGCTGGATGTGTCTGCGGCGT
t        a  t     g     t  t  tt gc        g cc        c     t       a          
                                                       a                        
                                                                                
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                 *                                         *                    
TTTATCATcTTCCTCTtCATCCTGC---TGCTATGCCTCATCTTCTTgTTGGTTCTTCTGGAcTAtCAAGGTATGTTGCC
        a     t g                              a         g    t gc gg           
                                                                                
                                                                                
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
CGTTTGTCCTCTAaTTCCA------G------GAt---C------------at------------CA------------A
   c        gc                    a                ta             g             
   g        c                                      c                            
                                                   g                            
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
Cc---------ACCAGcACgGGACCaTGCAaaACCTGCACgAcTCCTGCTCAAGGaAcCTCTATGTtTCCCTCaTGTTGC
 t           a  tgtc  g  c   cgg       ta taat  t      c a     c  a      t  c  t
 a                 a                      g                              c      
 g                                                                              
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                           *             *    *        *  *     
TGTACaAAACCTtCGGAcGGAAAtTGCACcTGTATTCCCATCCCATCATCcTGGGCTTTCGcAAaATtCCTATGGGAGTG
   t c     ca    ta    c     t                 g  t        a g  g  a            
                                                  a          t                  
                                                                                
                                                                                

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                              *                                 
GGCCTCAGtCCGTTTCTCcTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGTAGGGCTTTCCCCCACTGTtTGGC
        c         t                c  a              g  cc             t   c    
                  a                                                             
                                                                                
                                                                                

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
TTTCAGtTATATGGATGATGTGGTaTTGGGGGCCAAGTCTGTACAaCATCTTGAgTCCCTTTtTaCCgCTgTTACCAATT
   t  c   g t      c    tc       g  aa    g cg  c g   ag      a g  t  a     c   
                   a                                                            
                                                                                
                                                                                

       890       900       910       920       930       940       950       960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                       * *                      
TTCTTTTGTCTtTGGGTATACATTTaAAcCCtaAcAAAACaAAaa------GaTGGGGcTAcTCccTtaAcTTcATGGGa
    gc a   c    c  c   c g  ta ccct  g  c  gc       t     t  taatt ac t  t     t
           g                    t g     t           g     a        g           c
                                g       g           c              c           g
                                                                                

       970       980       990      1000      1010      1020      1030      1040
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                     *                                       *  
TATgTaATTGGaaGTTggGGtaCaT-TgCCaCAgGAaCAtATtgTAcaaAAAaTCAAacaaTGTTTTaGaAAACTtCCTg
  ca c     gt c at  ct t   a  g  a  t  c  caggttg  gc t  ggtg  c  cc g   t g  ca
     t     cg       gg c      c     c     a a a c   t g   a c        t     c    
           t        a  g      t     g           t         t t        c          
                                                                                

      1050      1060      1070      1080      1090      1100      1110      1120
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                           *    
TaAAcaGgCCTATTGATTGGAAAGTaTGTCAacGaATTGTGGGTCTTtTGGGcTTTGCtGCcCCtTTtACaCAATGTGGt
ct  tc a  ag    c     g  c  c  ga t  a ca  a  gc a  t  c  c  t  a  c  g        a
 c     t  c              g        c        g  c     g        a  c     t        c
       c                 t        g        c        a                 c        g
                                                                                

      1130      1140      1150      1160      1170      1180      1190      1200
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
TAtCCtGCtTTaATGCCtTTaTATGCaTGTATaCAAgCtAAgCAGGCTTTcACTTTCTCGCCAACTTACAAGGCCTTTCT
  c  a  cc gca   cc g  ca c  c  tactt acga  a     tgtc  t        g  t  aa t  ct 
     c  a  c              g     c  g  g                                         
        g                          c  c                                         
                                                                                

      1210      1220      1230      1240      1250      1260      1270      1280
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                              * 
gtGTAAACAaTAtcTGAACCTTTACCCCGTTGCcCGGCAACGGcCaGGTCTgTGCCAAGTGTTTGCTGACGCAACCCCCA
aaacccc  g  ca  cc               ta        t t  c  c                 t          
cc           t                   g         g c     t                            
                                 a                 a                            
                                                                                

      1290      1300      1310      1320      1330      1340      1350      1360
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
CTGGcTGGGGCTTGGccATaGG-CCATCagCGCATGCGTGGAACCTTTgTGgCTCCTCTGCCGATCCATACTGCGGAACT
    t          ttc g c    c gc   c    c  g      cc t    gt a           c        
    a           a  t                            ta                     g        
                g  c                            ag                              
                                                                                

      1370      1380      1390      1400      1410      1420      1430      1440
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
           *                                                                    
CCTAGCcGCTTGTTTTGCTCGCAGCcGGTCTGGaGCaAAacTtaTCGGgACtGAcAAcTCTGTtGTcCTcTCcCGgAAaT
   t  a  c  c  c         a       g  g cca cc t  a  c  t  t  c  c  t  t  ta c  g 
   g  t                                g     a  c  g        g     g  a  g  a    
      g                                t        t  a              a        t    
                                                                                

      1450      1460      1470      1480      1490      1500      1510      1520
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
           *                                                                    
AtACaTCcTTTCCATGGCTGCTaGGcTGTgCTGCCAACTGGATCCTgCGCGGGACGTCCTTTGTtTACGTCCCGTCGGCG
 c  c  g ac           c  g   a             t  t  a  a           c        c  a  a
       a                 t                 a  a                                 
       t                 a                                                      
                                                                                

      1530      1540      1550      1560      1570      1580      1590      1600
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
    *                                                                           
CTGAATCCcGCGGACGACCCgTCtCGGGGcCGcTTGGGaCTCTacCGtCCcCTTCTcCgtCTGccGTtcCggCCGACCAC
        t        t  c  c  c  t  tc    ga g ct  c  g  c  ttac  att  at aa  at g  
        a           t  g  a           cg t g      t     g t   cg       t        
                    a                 t    t            a                       
                                                                                

      1610      1620      1630      1640      1650      1660      1670      1680
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
GGGGCGCACCTCTCTTTACGCGGtCTCCCCGTCTGTGCCTTCTCATCTGCCGGaCCGTGTGCACTTCGCTTCACCT---C
   t                   a            t       g  ca    t                          
                       c                             c                          
                                                     g                          
                                                                                

      1690      1700      1710      1720      1730      1740      1750      1760
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                     *                                                          
TG---CACGTc------GCATGGAgACCACCGTGA---------ACGCCCac------ca---------------g----
          t      a     ca   g  a              a ttgt      ag   a   at      -    
                                                  ca      tt   g   tg      a    
                                                          g    c   ca           
                                                               t   g            

      1770      1780      1790      1800      1810      1820      1830      1840
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-----gtCt------------TGCCCAA------------------------G---------------------------
     --tc                a c                        a                           
     aaa                 t                                                      
      cg                                                                        
                                                                                

      1850      1860      1870      1880      1890      1900      1910      1920
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---G------------------------TCTTaCATAAGAGGACTCTTGGACTctCaGcA------------ATGTCAAC
   c                         g  gt    ac     a       tcttatg            cg     t
                                                     gg g gt                    
                                                           c                    
                                                                                

      1930      1940      1950      1960      1970      1980      1990      2000
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
GACCGACCTTGAGGCaTACTTCAAAGACTGTgTgTTTAaaGAcTGGGAGGAGtTGGGGGAGGAGatTAGgTTA---AaGg
a   tgga c  aaac   a    g      t a  cgcg  g     a  acca   a t   gcc  ac g    t a
               g                       t                        tag            t
                                                                cg              
                                                                                

      2010      2020      2030      2040      2050      2060      2070      2080
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
T--c---TTTG------------T------------AcTaGGAGGCTGTAGGCA---TA---------------------
   -  c a                            t g                 g                      
   t  g                                                                         
      t                                                                         
                                                                                

      2090      2100      2110      2120      2130      2140      2150      2160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-----------------AATTGGTcTGttCA-CCA---------------------------------------------
                        gc cgt                                                  
                                                                                
                                                                                
                                                                                

      2170      2180      2190      2200      2210      2220      2230      2240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---------------GCACCATGCAA------------------------------------------------------
               t  t                                                             
                                                                                
                                                                                
                                                                                

      2250      2260      2270      2280      2290      2300      2310      2320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---CTTT---TTCAC---------CTCTGCCTAATCATCT---CaTGTTCATGTCCtACTGTTCAAGCCTCCAAGCTGTG
                                 g         tt   a     t c   t                   
                                            c                                   
                                                                                
                                                                                

      2330      2340      2350      2360      2370      2380      2390      2400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
CCTTGGGTGGCTTTgGGgCATG------------------------------------GACATTGACCCgTATAAAGAAT
      a       a aa                                             c  taat          
                                                                     a          
                                                                     c          
                                                                                

      2410      2420      2430      2440      2450      2460      2470      2480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
TTGGAGCTtCTGTGGAGTTACTCTC------tTTTTTGCCTTCTGACTTCTTTCCtTCtaTtcGaGATCTcCTcGAcACC
       aa cac   a  ga          g         gac  t  t ac  gaaag aa g  c  t  a  t  a
                               a         a g           a  c  c  t     a  t     t
                                         c                g  g        g         
                                                                                

      2490      2500      2510      2520      2530      2540      2550      2560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
GCCTCtGCTCTgTATCGGGAgGCCTTAGAGTCTCCgGAaCATTGtTCACCTCACCATACaGCACTcAGGCAAGCtATTcT
  tg a  ct actca a  a  tc    a  at t  g     ca cgaca t  c  t  ta a        ag ct 
  aa c     c        t  a        c  a           tt g        g              c  ag 
                                               g           c                    
                                                                                

      2570      2580      2590      2600      2610      2620      2630      2640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
gTGtTGGGGtGAgtTgATGAaTCTaGCcACCTGGGTGGGaagTAATTTGGAAGAtCCAGCATCcAGGGAatTAGTAGTca
t  c    tg  ac a    cct g  tt t        tgaa  c  ac c  c atattg tc a  cccga g  ag
c        a  cg             a           c tc        g     g     a     tg    t  t 
a           t                            c         t                            
                                                                                

      2650      2660      2670      2680      2690      2700      2710      2720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
gcTATGTcAAtgtT-AAtATGGGCcTAAAaaTcAGaCAAcTAtTGTGGTTTCAcATTTCcTGtCTtACTTTTGGaAGAGA
at     t  cac  c cg    tt g  gt t  g   t cc a     c  tg a  t  ca c tc     g a cc
                       aa     c        a g              c           g           
                                         t                                      
                                                                                

      2730      2740      2750      2760      2770      2780      2790      2800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
aACtGTtcTtGAgTATTTGGTgTCTTTtGGAGTGTGGATTCGCACTCCTcCtGCtTAtAGACCACCAAATGCCCCTATCT
ggtg  ca a  a  c     c  c  c  g        c     a  caaac a  c  g   tat            c
t  a  at c           a                          a tc  c                         
c  c  gg                                                                        
                                                                                

      2810      2820      2830      2840      2850      2860      2870      2880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
TATCAACACTTCCGGAaACTACTGTTGT------TAG------A------C------GA------cG---AG------GC
    c  g        g a gg    a                       g      a cgggaca     t        
                    t                             t      c a a         c        
                                                                                
                                                                                

      2890      2900      2910      2920      2930      2940      2950      2960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
A------GGTCCCCTAGAAGAAGAACTCCCTCGCCTCGCAGACGAAGgTCTCAATCGCCGCGTCGCAGAAGATCTCAATC
         a     c     c          a      c    c  a        a         c        ac   
                                                                                
                                                                                
                                                                                

      2970      2980      2990      3000      3010      3020      3030      3040
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                  *             
TCGGG---a---ATCtCAATGTTAGTATtCCTTGGACtCATAAGGTGGGAAAcTTTACtGGGCTTTATTCTTCTACtGTa
  ca    c   tc ct       a   c  c     a  c  a     g  t  c  g  a  c  c  c     gact
        g   c                  g     g                       t  g           a  c
                                                                               g
                                                                                

      3050      3060      3070      3080      3090      3100      3110      3120
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                       *                                        
CCTgtCTTTAAtCCTgAaTGGcAAA---CtCCcTCtTTTCCTaAcATtCATTTacAggAgGAcATTaTtaAtAgaTGTcA
   tgt  c  ct  acg   at      a  t  c     ac t  a  c  gagcc aa tc cgccgca ag  cg 
   ac          c t   t       c  a        cg g  c        a      t g  ac c      a 
    a            c                       g  a           t            t          
                                                                                

      3130      3140      3150      3160      3170      3180      3190      3200
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
           *                                                                    
aCAATtTGTgGGcCCtCTtACaGTtAATGAaAAaaGgAGAtTaaAATTaATtATGCCTGCTAGgTTtTATCCtAaccttA
g  g ac  a  g  c  c  taaa  c  gttcc a  gc gc cc gg c     at c  a  c tc  c ctgac 
            t  a  a  c cc       cg           g     a     c              a tgtc  
            a  g        g                                                  aag  
                                                                                

      3210      3220      3230      3240      3250      3260      3270      3280
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
CcAAATATTTgCCctTaGAtAAaGGcATtAAACCtTATTATCCaGAacAtgtAGTTAATCATTACTTCcAaACtaGaCAt
 t  g  cc a  ac g  c  g  t  c     g  c  c  t  gt gccg           t  ta gg cc g  c
 g        t  ta    g     g  a     a        g  ta ca                      g      
 a                 a     a        c        c     at                      a      
                                                                                

      3290      3300      3310      3320      3330      3340      3350      3360
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
TATTTACAtACTCTgTGGAAGGCgGGtATttTATATAAgAGaGAaaCtACACgtAGCGCcTCATTTTGtGGGTCACCATA
     g  c  ct t     a  t  cg cc       ac g  gt ct t ac  t  a     c tc  a     t  
              a        a  g  a                 a  c  a     t                    
                          a                                                     
                                                                                

      3370      3380      3390      3400      3410      3420      3430      3440
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                  *                                                             
TTCTTGGGAACAAGAgCTACA---------------gCATGGga-------ggttggtcttccaaacctcgaaaaGGC--
 a c         a ta                   t  -----       ---------------------c--t -  
                                           g       ctacctctaa agtca aatc-gg     
                                                    c  a  gg  g cg     gg       
                                                           c                    

      3450      3460      3470      3480      3490      3500      3510      3520
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-------------------------------AtggggacgAATCTTT------------------------------Ctg
                               --------a  c ac                                ca
                                    aca      g                                g 
                                                                                
                                                                                

      3530      3540      3550      3560      3570      3580      3590      3600
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
        *                                                                       
ttccCAATCCtCTGGGATTCTTtCCCGAtCAcCAGTTGGAcCCtGCaTTCagAGCcAActCaaacAATCCAGATTGGGAC
ccaga  c  c        tc c  a gc  t   c    t  actg   gag  a  ta cgca g   c  c     t
 g        a           g                    g  c                g                
 a        g                                   t                                 
                                                                                

      3610      3620      3630      3640      3650      3660      3670      3680
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
tTCAAcCCcaaCAAGGAccacTGGCCaGagGCcAAccAGGTaGGA---GtgGGAgCATTCGGGCcaGGgTTCACcCCaCC
ca   taagct   a  tact   a gacct acgta    g       ct   tgc at  t tg  ac   tt  t  
        at         ga     tcta   t g              a     t     a  t  t     a  c  
                             t                                c              g  
                                                                                

      3690      3700      3710      3720      3730      3740      3750      3760
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
aCAcGGcgG------------tcTtTTGGGGTGGAGCCCTCAGGCTCAGGGCaTatTgacaA------------------
c  t  aaa            cg gc          t  g  at a  a  tccgc acact                  
g     g              aa                a            g ta cg t                   
t     t               t                                  t                      
                                                                                

      3770      3780      3790      3800      3810      3820      3830      3840
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
------CagTGCCAgcAgctCCtCCTCCTGCCTCcACCAATCGgCAGTCAGGAAGgCAG--CCTACtCCcaTcTCTCCAC
       tt at  atgaaa  g        t  t        c g gtc  gc aa a    a  c  gc ga      
       c          tg  a        a           t   a g             c     at a       
       g                                                             tg t       
                                                                                

      3850      3860      3870      3880      3890      3900
....:....|....:....|....:....|....:....|....:....|....:....|
                                                            
CTcTaAG------agACAcTCATCCT------CAGGCCAT--G---CAGT--GGAA----
  t g        ga t ga     a        a  agc  a     a           
                   c                                        
                   g                                        
                                                            
© 1998-2022Legal notice