HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence S of genotype RF

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
* *   *  *     *       **      * *             ** **       ** *    *     * *** *
ATGGAGAaCAtcaCATCAGGAtTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAgAATCCTCAC
       g  cag    c   c    ca       t    ca          t        c        a
            t


        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                       *       **   *  ** *      *          *** *    **  *  *  *
AATACCgCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAaCacCCgtGTGTCtTGGCCAAAATTCGC
      aa                              g           aggtta  ac     c     t     t
                                                    t c    g     g
                                                      g

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*   **  * *  *   * **  *     *  *           **    ** *  *    *   *    **     * *
AGTCCCcAACCTCCAATCACTCACCAACCTCcTGTCCTCCAAcTTGTCCTGGtTATCGCTGGATGTGTCTGCGGCGTTTT
      a  t     g           tt gt       ag tc        c     t       a
                                                    a


       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
* *    *     *  *  *      *****   *   *  *  *       ***         *       * *   *
ATCATaTTCCTCTTCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTAtCAAGGTATGTTGCCCGTTTG
     c       g                    c      a         g    t gc  g              g



       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*        *           *           *   * **       ***        **             *
TCCTCTAaTTCCAGGAtCaTCaACcACCAGCACgGGACCaTGCAaaACCTGCACgAcTCCTGCTCAAGGaACCTCTATGT
      gc        a ta g  tg a  tgtc  ga c   cgg       ta taa   t    a c a
      c           c     a        a  c  t
                  g     g

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  * **  *  *  * *   * *      *          *   ******  *  ***        ***  *    **
tTCCCTCcTGTTGCTGTACaAAACCTtCGGAcGGAAAtTGCACcTGTATTCCCATCCCATCATCcTGGGCTTTCGcAAaA
a      t  c  t    tc      at   t     c     t                 g  t          g  g
       a                                                        a          t


       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   * **       *  *  ** ** ** **       **      *       * *   *  *     *  **    **
TtCCTATGGGAGTGGGCCTCAGtCCGTTTCTCcTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGTAGGGCTTTC
a                 t  c         t          c     c                    c
                                a


       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
**    **  ***   *     *    **  *    *     **                 * *  **
CCCCACTGTtTGGCTTTCAGTTATATGGATGATGTGGTATTGGGGGCCAAGTCTGTACAaCATCTTGAGTCCCTTTtTAC
     t   c       t  c   g t      c    tc       g  aa    gtcg  c g   ag      a g
                                 a


       650       660       670       680
....:....|....:....|....:....|....:....|.
            **        *    ***    *   *
CgCTgTTACCAATTTTCTTTTGTCTTTGGGTATACATTTaA
t  a      c      gg     c    c      c g