HBVdb

Dataset for nucleotide sequence PreS2 of genotype RF

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
       * *                                 *                      *  * ***  *   
ATGCAGTGGAAcTCCACaACcTTCCACCAAgCTCTgCaAGAtCCCAGaGTgAGgGGCCTgTAtTTtCCTGCTGGTGGCTC
gca       ct  a gcgaa  t tt   a  t tttg  c    aga c aa ct  aa cc c              
              t  t  t              a              a        t                    
                    g                                                           

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                  ** *  **  *                          *     *    ** **  *  *   
CAGTTCaGGAACAGTAAACCCTGTTCCGAcTAcTGcCTCtCcCaTaTCGTCAATCTTCtCGAgGAcTGGGGACCCTGCac
a c   c cggt acg g     c  aa actt  ta  aga tcc ta    c  caa   a  t         tga
             c c                     g                  g   c                g
                                                                               t

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  *  ***   *  *     *       **    *****     *  *    ** **       ** *    **    * 
cGAACATGGAGAaCAtcACATCAGGATTCCTAGGACCCCTgCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAgAATC
  t        cag    c   c    cac      t    ca          ta       c        a    
                                                                              
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*** *  *  *      *          *  **   ***  *  ** *      *          *** *    **  * 
CTCACAATACCgCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAaCacCCgtGTGTCtTGGCCAAAA
           aa                              g           aggtta aac     c         
                                                         tac    g     g         
                                                           g    a               

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 * ****  **  * * **   * **  * *   *  ***   *     **    ** * **    *   *    ** * 
TTCGCAGTCCCCAACCTCCAATCACTCACCAACCTCcTGTCCTCCAAcTTGTCCTGGtTATCGCTGGATGTGTCTGCGGC
  t         t     g              gt       ag tc        c     t       a        
                                                         a                      
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  * * * **   **    *  *  *      *****   **  ** *  *  *    *** *     ****      * 
GTTTTATCATaTTCCTCTTCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGAcTAtCAAGGTATGTTGCCC
          c       g                           a         g    t gc  g            
                                                                                
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*   * *        *         * *  *        **  * **       ***        **             
GTTTGTCCTCTAaTTCCAGGAtCaTCaACcACCAGCACGGGACCaTGCAgaACCTGCACGAcTcCTGCTCAAGGaACCTC
  g        gc        a ta g  t  a ctgta  ga c   cag       ta taa   ta g aac a   
                       c     a        c   t t                 c                 
                       g                                                        

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*      * **  *  *  * *   * ** *   *         **** ******** * ***    *   **** *   
TATGTtTCCCTCcTGTTGCTGTACaAAACCTTCGGAcGGAAAcTGCACcTGTATTCCCATCCCATCATCcTGGGCTTTCG
     a      t  c  t    tc      at   t     t     t                 g  t          
            a                                                        a          
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 **     * ***      ** ** ** ********     * **  *   *    ** * *   *  **    *  ** 
cAAaATtCCTATGGGAGTGGGCCTCAGcCCGTTTCTCcTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGTAGGG
g  g  a                 t  t         t          c     c                    cc   
t                                    a                                          
                                                                                

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  ***** *  **  ***  **     *  * **  *  * *     ***               ** *  **       
CTTTCCCCCACTGTtTGGCTTTCAGTTATATGGATGATGTGGTATTGGGGGCCAAGTCTGTACAaCATCTTGAGTCCCTT
          t   c       t  c   g t      c    tc       g  aa    gtcg  c   ag     
                                      a                                         
                                                                                

       810       820       830       840      
....:....|....:....|....:....|....:....|....:.
*            *   ***       *   ****    *   * *
TtTACCgCTgTTACCAATTTTCTTTTGTCTTTGGGTATACATTTaA
 a g  t  a      c      gg     c    c      c g 
   t                                          
                                              
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