HBVdb

Dataset for nucleotide sequence PreS2 of genotype RF

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
       * *                                 *                      *  * ***  *   
ATGCAGTGGAAcTCCACaACcTTCCACCAAaCTCTgCaAGAtCCCAGaGTgAGgGgCCTgTAttTtCCTGCTGGTGGCTC
g a       ct  a gcgaa  t tt   g    tttg  c  a aga c aa ct  a  cc c              
              t  t  t              a              a        t                    
                    g                                                           

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                  ** *   *  *                          *          ** **     *   
CAGTTCaGGAACAGTaAACCCTGtTCcGAcTACTGcCTCtCcCaTATCGTCAATCTTcTCGAgGAcTGGGGACCCTGcaC
a     c cgg  acg g     c  aa ac t  t   aga tcc ta       caa   a  t        t  tga
             c c                       gt                 g   c                g
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     ***   *  *     *       **      * *             ** **       ** *    *     * 
cGAACATGGAGAaCAtcaCATCAGGAtTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAgAATC
t   t        cag    c   c    cac      t    ca          ta       c        a    
a                t                                                              
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*** *  *  *                 *  *    ***  *  ** *      *          *** *    **  * 
CTCACAATACCgCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAaCacCCgtGTGTCtTGGCCAAAA
           aa                              g           agg ta  ac     c         
                                                         t c    g     g         
                                                                                

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 * ****  **  * * **   * **  * *   *  * *         **    ** * **    *   *    **   
TTCGCAGTCCCcAACCTCCAATCACTCACCAACCTCcTGTCCTCCAAcTTGTCCTGGtTATCGCTGGATGTGTCTGCGGC
  t         t     g            t gt       ag tc        c     t       a        
                                                         a                      
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  * * * **   *     *  *  *      *****   **  ** *  *  *    *** *     * **      * 
GTTTTATCATaTTCCTCTTCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTAtCAAGGTATGTTGCCC
          c       g                           a         g    t gc  g            
                                                                                
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*   * *        *         * *           *   * **       ***        **             
GTTTGTCCTCTAaTTCCAGGAtCaTCaACcACCAGCACgGGACCaTGCAgaACCTGCACgAcTCCTGCTCAAGGAACCTC
  g        cc        a ta g  tg a  tgtc  ga c   cag       ta taa   t  g a c a   
           g           c     a        a     t                 c                 
                       g     g                                                  

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*      * **  *  *  * *   * ** *   *          *** *******  * ***        ***  *   
TATGTtTCCCTCcTGTTGCTGTACaAAACCTtCGGAcGGAAAcTGCACcTGTATTCCCATCCCATCATCcTGGGCTTTCG
     a      t  c  t    tc      at   t     t     t                 g  t          
            a                                                        a          
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 **     * **       *  *  ** ** *****     * **      *    ** * *   *  *     *  ** 
cAAaATtCCTATGGGAGTGGGCCTCAGtCCGTTTCTCcTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGTAGGG
g  g  a                 t  c         t          c     c                       
t                                    a                                          
                                                                                

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   ****    **  ***   *     *    **  *  * *     **                 * *  **       
CTTTCCCCCACTGTtTGGCTTTCAGTTATATGGATGATGTGGTATTGGGGGCCAAGTCTGTACAaCATCTTGAGTCCCTT
          t   c       t  c   g t      c    tc       g  aa    gtcg  c   ag     
                                      a                                         
                                                                                

       810       820       830       840      
....:....|....:....|....:....|....:....|....:.
*            *   **        *   ****    *   *  
TtTACCgCTgTTACCAATTTTCTTTTGTCTTTGGGTATACATTTaA
 a g  t  a      c      gg     c           c 
                                              
                                              
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