HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence PreS2 of genotype RF

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
       * *                                 *                      *  * ***  *
ATGCAGTGGAAcTCCACaACcTTCCACCAAaCTCTgCaAGAtCCCAGaGTgAGgGGCCTgTAttTtCCTGCTGGTGGCTC
g a       ct  a gcgaa  t tt   g    tttg  c  a aga c aa ct  a  cc c
              t  t  t              a              a        t
                    g

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                  ** *   *  *                          *          ** **     *
CAGTTCaGGAACAGTaAACCCTGtTCcGAcTACTGcCTCtCcCaTATCGTCAATCTTcTCGAgGAcTGGGGACCCTGCaC
a     c cgg  acg g     c  aa ac t  t   aga tcc ta       caat  a  t        t  tga
             c c                       gt                 g   c                g


       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     ***   *  *     *       **      * *             ** **       ** *    *     *
cGAACATGGAGAaCAtcaCATCAGGAtTCCTAGGACCCCTgCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAgAATC
t   t       g  cag    c   c    cac      t    ca          ta       c        a
a                t


       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*** *  *  *                 *  *    ***  *  ** *      *          *** *    **  *
CTCACAATACCgCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAaCacCCgtGTGTCtTGGCCAAAA
           aa                              g           agg ta  ac     c
                                                         t c    g     g
                                                           g    a

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*  ***  **  * * **   * **  * *   *  * *         **    ** * **    *   *    **
TTCGCAGTCCCcAACCTCCAATCACTCACCAACCTCcTGTCCTCCAAcTTGTCCTGGtTATCGCTGGATGTGTCTGCGGC
  t        a  t     g            t gt       ag tc        c     t       a
                                                         a


       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  * * * **   *     *  *  *      *****   **  *  *  *       *** *     * **      *
GTTTTATCATaTTCCTCTTCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTAtCAAGGTATGTTGCCC
          c       g                           a         g    t gc  g



       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*   * *        *         * *           *   * **       ***        **
GTTTGTCCTCTAaTTCCAGGAtCaTCaACcACCAGCACgGGACCaTGCAgaACCTGCACgAcTCCTGCTCAAGGAACCTC
  g        cc        a ta g  tg a  tgtc  ga c   cag       ta taa   t  g a c a
           g           c     a        a     t                 c
                       g     g

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*      * **  *  *  * *   * **     *          * * ******* ** ***        ***  *
TATGTtTCCCTCcTGTTGCTGTACaAAACCTtCGGAcGGAAAcTGCACcTGTATTCCCATCCCATCATCcTGGGCTTTCG
     a      t  c  t    tc      at   t     t     t                 g  t
            a                                                        a


       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
**     * **       *  *  ** ** *****     * **      *    *  * *   *  *     *  **
cAAaATtCCTATGGGAGTGGGCCTCAGtCCGTTTCTCcTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGTAGGG
g  g  a                 t  c         t          c     c                    c
t                                    a


       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   ****    **  ***   *     *    **  *  * *     **                 * *  **
CTTTCCCCCACTGTtTGGCTTTCAGTTATATGGATGATGTGGTATTGGGGGCCAAGTCTGTACAaCATCTTGAGTCCCTT
          t   c       t  c   g t      c    tc       g  aa    gtcg  c g   ag
                                      a


       810       820       830       840
....:....|....:....|....:....|....:....|....:.
             *   **        *   ****    *   *
TtTACCgCTgTTACCAATTTTCTTTTGTCTTTGGGTATACATTTaA
a g  t  a      c      gg     c           c g