HBVdb

Dataset for nucleotide sequence PreS2 of genotype E

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 *     ** * *       *** *   *   **  *       **   *                   * ******** 
ATGCAGTGGAATTCCACAACATTCCACCAAGCTCTGCAGGATCCCAGAGTAAGAGGCCTGTATtTTCCTGCTGGTGGCTC
g a  a       a  a g    t  t   a    a  aa      ag    ag  t   ---c-c              
                                                               -c-              

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   **  *  * **  *  * ***** **   * *  ** * *   **  ***    *** * ** ***** ** **   
CAGTTCCGGAACAGTGAACCCTGTTCCGACTACTGCCTCACTCATCTCGTCAATCTTCTCGAGGATTGGGGACCCTGCAC
             a                   t     a                            t     
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  *  ** *    **  ** **   * ****   ******** **  ** **** *** **** ** ***** ***** *
CGAACATGGAAAGCATCACATCAGGATTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAAAATC
          gga   t      a                      a           a    c                
          c                                                                     

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
**** *** **  *** ******* ************* **** * ** ******    *****  *  * *********
CTCACAATACCGCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAGCTCCCGTGTGTCTTGGCCAAAA
              a                          g           a tt           g         
                                                         a            c         

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
** ** ** ** ** ** ** ***** ** ** **** ******  *  ** ***** * *** * ***** ** *****
TTCGCAGTCCCCAAcCTCCAaTCACTCACCAACCTCTTGTCCTCCAATTTGTCCTGGCTATCGCTGGATGTGTCTGCGGC
  t        a  t     g        t               g cc        t     t                
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
** **  *** * **************** * ***** **** ** *  ** ***** ** ** **  ** ** **** *
GTTTTATCATCTTCCTCTTCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTATCAAGGTATGTTGCCC
          a                                                        c            
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*  *** * * *   **  ** *  * *  *  *     **        *  * ***** **    * *      * ***
GTTTGTCCTCTAATTCCAGGATCATCAACCACCAGTACGGGACCCTGCCGAACCTGCACGACTCTTGCTCAAGGAACCTC
  c         c          cc g        c           ta               c               
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*      **** *** ** **   ***  *    *    *** *** * ****  ******** ***** ******** *
TATGTTTCCCTCATGTTGCTGTTCAAAACCTTCGGACGGAAATTGCACTTGTATTCCCATCCCATCATCATGGGCTTTCG
               c       t                                                        
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 * *** ********  ******* ** ***** **   ** **  ** ********  * ** ** ********  ** 
GAAAATTCCTATGGGAGTGGGCCTCAGCCCGTTTCTCCTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGCCGGG
      a                            t                            g        ta   
                                                                              

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
******* ** **  * *** *  * **  **** ******** *****  * *   **   *  ** *** *  *  **
CTTTCCCCCACTGTCTGGCTTTCAGTTATATGGATGATGTGGTATTGGGGGCCAAGTCTGTACAACATCTTGAGTCCCTT
          t   t                                     g  aa   a      c      g     
                                                                                

       810       820       830       840      
....:....|....:....|....:....|....:....|....:.
*  **  **   ** ***** **  ** ** **** ** **  * *
TATACCTCTGTTACCAATTTTCTTTTGTCTTTGGGTATACATTTAA
     tg    g  t         c          c      c g 
                                              
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