HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence S of genotype D

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                               *
ATGGAGAACATCACATCAGGATTCCTAGGACCCCTgCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAGAATCCTCAC
     a g             c             t                      c           ag




        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                  *
AATACCGCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGaACtACCGTGTGTCTTGGCCAAAATTCGC
      aa                              g           ag ac          g
                                                      a
                                                      y
                                                      g

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                    *                             *     *
AGTCCCCAACCTCCAATCACTCACCAACCTCCTGTCCTCCAACTTGTCCTGGTTATCGCTGGATGTGTCTGCGGCGTTTT
                               t        g     a     a     t       a        a




       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                          ** *
ATCATcTTCCTCTTCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTATCAAGGTATGTTGCCCGTtTG
     a                                                     c gg              c
     m                                                        c              g



       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

TCCTCTAATTCCAG------G---ATCtTCAACcACCAGCacGGGACCATGCaGAACCTGCACGACTcCTGcTCAAGGAA
      gc                   c  g  t      gt    a c   cag       t   aat  t  g
                           a     a            t       c           c
                           g


       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                            *                * *
CCTCTATGTATCCCTCCTGTTGCTGTACcAAACCTTCGGACGGAAATTGCACCTGTATTCCCATCCCATCATCcTGGGCT
        at      a  c  t    ta     c t   t     c     a                 g  t
                t                                                        a



       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
              *                                                      *
TTCGGAAAATTCCTATGGGAGTGGGCCTCAGCCCGTTTCTCcTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGT
    c                                    t          c         c                c
                                         a



       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                         *
AGGGCTTTC------CCCCACTGTTTGGCTTTCAGTTATATGGATGATGTGGTATTGGGGGCCAAGTCTGTACAgCATCT
                    t           t      g t           t           aa   cgtca  c
                    y           y                                r     t  c  y
                                                                          r


       650       660       670       680       690
....:....|....:....|....:....|....:....|....:....|....:.
                            *
TGAGTCCCTTTTTACCGCTGTTACCAATTTTCTTTTGTCTTTGGGTATACATTTAA
    g      a         a            c     c    cg      -g-
                                        g             -