HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence C of genotype D

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                           ** *            *    *  **
ATGGACATtGAcCCTTATAAAGAATTTGGAGCTaCTGTGGAGTTACTCTCGTTTTTGCCTtCTGACTTCTTTCCTTCaGT
      c c  tt g                  t c   c          a         gac  t  t a   g  ca
              a                                   t         atg              g
                                                            c                t

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                             *                            *      *     *
ACGAGATCTTCTaGATACCGCCTCAGCTCTgTATCGGGAaGCCTTAGAGTCTCCTGAGCATTGtTCACCTCAcCATACTG
t  t  c  g  t  c  t  tg    gt a t   a  t  a     a   t    a   gtca tga   t     g
   g                  a       c        c  t                       g           c
                                          g

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   * *              *    *                      * * **  *      *
CACTCAGGCAAGCAATtCTtTGCTGGGGGGAacTAATGACTCTAGCtACCTGGGTGGGTGgTAATTTGGAAGATCCAacA
ta          tg ct g  t     a  ct t  ata t gt c  t        aata     ac c  c a gtg
             ct a  a           g                          c cc        t
                   c           t                             g

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                       *                             *
TCcAGgGACCTAGTAGTCAGTTATGTcAACACTAATATGGGCCTAAAGTTCAGGCAACTaTTGTGGTTTCACATTTCTTG
  t  a  t a   t  tgcc     t  tta cccg a c t g  a  tc a   t c  a         gc
        a     g    a                        t            a t            c
                                                           g

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
       ** *                                *   *  ***   *     * **             *
TCTCACTTTTGGAAGAGAAACgGTcaTAGAGTATTTGGTGTCTTTCGGAGTGTGGATTCGCACTCCTCCAGCTTATAGAC
c  t tg     g   c tgta  tt g  a           c  t                    a acc c
   a  c           c  c   c                                           g
                     t   g

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*      * *    *             **  *         *   ** *                **
CACCaAATGCCCCTATCtTATCAACACTTCCGGAgACTACTGTTgTTAGACGACGAG------GCAGGTCCCCTAGAAG-
ttat            c       g        a t tg    a     gaca  t           a        g
  a                                   g           t     c           c
  g

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
         * *                            *         *  *        *
--AAGAACTCCCTCGCCTCGCAGACGAAGgTCTCAATCGCCGCGTCGCAGAAGATCTCAATCTCGGGAA---tCTCAATG
              a              a   a              c     a  a     a   gc   c c  c




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TTAG
   a