HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence C of genotype D

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                 *         ** *            *  * *  **    *
ATGGACATtGAtCCTTATAAAGAATTTGGAGCTaCTGTGGAGTTACTCTCGTTTTTGCCTtCTGACTTCTTTCCTTCaGT
      c c  ct g                  t c   c          a         gac  t  t a   g  ca
              a                                   t         atg              g
                                                            c                t

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                             *                            *      *       *
ACGAGATCTTCTaGATACCGCCTCAGCTCTgTATCGGGAaGCCTTAGAGTCTCCTGAGCATTGttCACCTCAcCATACTG
g  t  c  g  t  c  t  tg    gt a t   a  t  a     a   t    a     ca tga   t     g
t  g                  a       c        c  t                       g           c


       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   * *              *    *                      * * **  *     **
CACTCAGGCAAGCAATtCTtTGCTGGGGGGAacTAATGACTCTAGCtACCTGGGTGGGtGgTAATTTGGAAGATCCAacA
ta          tg c  g  t     a  ct t  ata t gt c           aata     ac c  c a gtg
             ct a  a           g                          c cc        t      c
                   c           t                             g

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                       *   *                         *      *
TCcAGgGACCTAGTAGTcAGTTATGTcAACACTAATATGGGCCTAAAGTTCAGgCAACTaTTGTGGTTTCACATTTCTTG
  t  a  tta   t  tgcc     t  ttaacccg a c t g  a  tc a   t c  a         gc
        a     g    a                        t            a t            c
                                                           g

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
       ** *                           *    *   *  ***   *     * **             *
TCTCACTTTTGGAAGAGAAACgGTcaTAGAGTATTTGGTGTCTTTCGGAGTGTGGATTCGCACTCCTCCAGCTTATAGAC
c  t tg     g   c tgta  tt t  a           c  t                    a acc c
   a  c           c  c   c                                           g  a
                     t   g

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*     ** *    * *    *      **  *       * *   ** *                **
CACCaAATGCCCCTATCtTATCAACACTTCCGGAGACTACTGTTgTTAGACGACGAG------GCAGGTCCCCTAGAAG-
  aat            c       g        a t tg    a     ga a  t           a        g
  g                                   g           t     c           c
  t

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
         * **                           *     *   *  *        *                *
--AAGAACTCCCTCGCCTCGCAGACGAAGgTCTCAATCGCCGCGTCGCAGAAGATCTCAATCTCGGGAAt---CTCAATG
              a              a   a              c     a  a     a   gcc    c  c




....

TTAG
   a