HBVdb

Dataset for nucleotide sequence C of genotype D

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                 *         ** *            *  * *  **    *                      
ATGGACATtGAtCCTTATAAAGAATTTGGAGCTaCTGTGGAGTTACTCTCGTTTTTGCCTtCTGACTTCTTTCCTTCaGT
      c c  ct g                  t c   c          a         gac  t  t a   g  ca 
              a                                   t         atg              g  
                                                            c                t  

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                             *                            *      *       *      
ACGAGATCTTCTaGATACCGCCTCAGCTCTgTATCGGGAaGCCTTAGAGTCTCCTGAGCATTGttCACCTCAcCATACTG
g  t  c  g  t  c  t  tg    gt a t   a  t  a     a   t    a    tca tga   t     g 
t  g     a            a       c        c  t                       g           c 
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   * *              *    *                      * * **  *     **  *             
CACTCAGGCAAGCAATtCTtTGCTGGGGGGAacTAATGAcTCTAGCtACCTGGGTGGGTGgTAATTTGGAAGATCCAacA
 ta          tg c  g  t     a  ct t  atact gt c           aata     ac c  c a gtg
             ct a  a           g     t                    c cg        t      cg 
                               t                             c                  

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                       *   *                         *      *   
TCcAGgGACCTAGTAGTCAGTTATGTcAACACTAATATGGGCCTAAAGTTCAGGCAACTaTTGTGGTTTCACATTTCTTG
  t  a  tta a t  tgcc     t  ttaacccg a c t g  a  tc a   t c  a         gc      
        a     g    a                        t            a t            c       
                                                           g                    

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
       ** *                           *    *   *  ***   *     * **             *
TCTCACTTTTGGAAGAGAAACgGTcaTAGAGTATTTGGTGTCTTTCGGAGTGTGGATTCGCACTCCTCCAGCTTATAGAC
c  t tg     g   c tgta  tt    a           c  t                    a acc a  c    
   a  c           c  c   c                                          tg  c       
                     t   g                                                      

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*     ** *    * *    *     ***  *       * *   ** *                **            
CACCaAATGCCCCTATCtTATCAACACTTCCGGAGACTACTGTTgTTAGACGACGAG------GCAGGTCCCCT---AGA
  aat            c       g        a t tg    a     ga a  t           a           
  g                                   g           t     c           c           
  t                                                                             

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
         * **                           *     *   *  *        *                *
AGAAGAACTCCCTCGCCTCGCAGACGAAGgTCTCAATCGCCGCGTCGCAGAAGATCTCAATCTCGGG---AAtCTCAATG
g             a              a   a              c     a  a     a      gcc c  c  
                                                                                
                                                                                

    
....
    
TTAG
   a
    
    
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