HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence PreC of genotype C

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

ATGCAACTTTTTCACCTCTGCCTAATCATCTCaTGTTCATGTCCtACTGTTCAAGCCTCCAAGCTGTGCCTTG-GGTGGC
                       g        t         t c
                                c


        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                             *
TTTgGGgCATGGA-CATTGACC---CgTATAAA--------------GAATTTGGAGCTTCTGTGGAGTTACTCTCT---
   a aa          c   a   aa                               a  c c       a    g
                     g    c                               c  a              a
                          t

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
            *
TTTTTGCCTTCTGACTTcTTTCCtTCtATTCGaGATCTCCTCGACACCGCCTCtGCTCTgTATCGGGAGGCCTTAGAGTC
        gg c  t  t  c  gaacg    t  c  ta t        ta a  ct ac c  a  t   c g
         a g           a  g     g  g  a           ag c     c


       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                   *              *                          *
TCCGGAACATTGTTCACCTCACCATACAGCACTcAGGCAAGCTATTCTGTGTTGGGGTGAGTTGATGAATCTGGCCACCT
   a  g     ca tga      c  c  ca a        cg cg a       t   a  a    gct a  a  t
                                              t t                          t
                                                c

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

GGGTGGGAAGTAATTTGGAAGAcCCAGCATCCAGGGAATTAGTAGTcaGCTATGTCAATGTTAATATGGGCCTAAAAaTC
       tg c   c    c  t ag      c a  cgc a t  ag t     t  ca    c      a g  gc t
                         t           t     g                                 t


       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                      *
AGACAAcTAtTGTGGTTTCACATTTCCTGTCTTACTTTTGGAAGAGAAACTGTTCTtGAGTATTTGGTGTCTTTTGGAGT
  g   a gc       c  t  c  t  c  c  c       accccgtg  c  a  a  cc    a  c  c  g
      t                                        t  c  a  c


       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
           *           *
GTGGATTCGCACTCCTcCcGCTTACAGACCACCAAATGCCCCTATCTTATCAACACTTCCGGAAACTACTGTTGTTAGAC
      c  t  a  cattc a  t  g    a             c                g   gg    a     t
                gaa  c                                             t
                  g

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|

------GACGAGGCAGGTCCCCTAGAAGAAGAACTCCCTCGCCTCGCAGACGAAGGTCTCAATCGCCGCGTCGCAGAAGA
      a a  t     a  t                          c       a        a         c
      c


       650       660
....:....|....:....|....:..

TCTCAATCTCGGGAATCTCAATGTTAG
a  a         gcc ct     ---
                          a