HBVdb

Dataset for nucleotide sequence P of genotype C

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                    *      *                                    
ATGCCCCTATCTTATCAACACTTCCGGAAACTACTGTTGTTAGAC------GA------C------GA------GGCAGG
           c                g   g     a     t      a       a              t     
                                                   c                            
                                                                                
                                                                                

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     *                                                                    *     
TCCCCTAGAAGAAGAACTCCCTCGCCTCGCAGACGAAGGTCTCAATCGCCGCGTCGCAGAAGATCTCAATCTCGGGAATC
a  t                          c       a        a               a  a         g c 
                                                                                
                                                                                
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
           *     *   *  *    *            *        *                            
TCAATGTTAGTATCCCTTGGACTCATAAGGTGGGAAACTTTACTGGGCTTTATTCTTCTACTGTACCTGTCTTTAATCCT
ct           t  c      c           t     g  a     c     c    ct   a t  c  ct c
             a                                c                 g               
                                                                                
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
    *       **     * **       *                                   *      *      
GAgTGGCAAACTCCCTCcTTTCCTcACATTCATTTacAgGAGGAcATTATtaAtAGATGTCAACAATaTGTgGGCCCTCT
  c   a g     t  t      agt  a  c  gaga  a  t     cgcc  g  cg      tc  a  t     
  a              a      g a           t                                         
  t                                                                             
                                                                                

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
        *                    *                *      *             *            
TACAGTTAAtGAAAAAAGGAGATTAAAATTaATtATGCCTGCTAGGTTcTATCCTAAcCTTACCAAATATTTGCCcTTgG
c ataca  c  g  gc a   c gtcg  g  c     g  c  a  t t   c  atgc  t  g  cc a  tc a 
      c                          a     c                 ta                a    
                                                         g                      
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
        *         *                         *                     *           * 
AtAAAGGCATtAAACCtTATTATCCTGAACATgcAGTTAATCATTACTTCaAAACTAGgCATTATTTACATACTCTGTGG
 c  g  t  c     a  c     g   t catg              tc  g cc a        g  c  ct t   
                g        c   a                                           g      
                c                                                               
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
       *                       *             *      *     *  *                  
AAGGCtGGcATTcTATATAAGAGAGAAACTACaCGCAGcGCCTCATTTTGTGGGTCACCATATTCTTGGGAACAAGAGCT
  a  g  t   t       a        c  t at  t  t     c  c                             
     a                          c  a                                            
                                                                                
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*                                                                               
ACAGCATGGGA---GGTTGGTCTTCCAAACCTC------GAcAAGGCATGGGGACgAATCTTTCTGTTCCCAATCCTCTG
     ------   ------------              ga             a  c  g  g  g  a     g   
                 cat  c  a                                   c  c               
                  c                                                             
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 * *                                                         *                  
GGATTCTTTCCCGaTCACCAGTTGGACCCtGCgTTCGGAGCCAAcTCAAACAATCCAGATTGGGACTTCAACCCCAACAA
     t  g   agc  t        t  g  a  ta       t  c        c        tc             
                             a  t                                               
                                                                                
                                                                                

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
        *                                                                       
GGATCAcTGGCCAGaGGCAAAtCAGGTAGGAGcGGGAgCaTTCGGGCCAGGGTTCACcCCACCACACGGCggT-------
   c ca     taca  ccgc     g    ta   t c     a  g        t     c     aaac       
      t     g      t g                 t                       t                
                                                               g                
                                                                                

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-----CTTTTGGGGTGGAGCCCTCAGGCTCAGGGCATATTGACAACAGTgCCAG-------------------------A
                   t  g   a    a   gctc a     g ca a ac                      gcg
                                   c g        c      -t                       tt
                                                                                
                                                                                

       890       900       910       920       930       940       950       960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
GCaCCTCCTCCTGCCTCCACCAATCGGCAGTCAGGAAGACAGCCTACTCCCATCTCTCCACCTCTAAGAGACAGTCATCC
a g           aa tg                g  g g   c  g     t        g        a cc     
  t                                                                             
                                                                                
                                                                                

       970       980       990      1000      1010      1020      1030      1040
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
TCAGGCCATGCA-GTGGAACTCCAcaACaTTCCACCAAGCTCTGCTAGAtCCCAGAGTGAGGGGCCTaTActTTCCTGCT
g      gca   a     t    gc  t  t  t  ga    at    c  a a   ac-------t--tc-c      
                        a   c                             --aa  t  c  --a       
                                                                   -            
                                                                   g            

      1050      1060      1070      1080      1090      1100      1110      1120
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                           *                                                    
GGTGGCTCCAGTTCCGGAACAGTAAACCCTGTTCCGACTACTGCCTCaCCCATATCGTCAATCTTCTCGAGGACTGGGGA
        a     a  g   ac  g            c t  t   t    cc  a          t  a  t      
                      g                                                         
                                                                                
                                                                                

      1130      1140      1150      1160      1170      1180      1190      1200
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
         *     *   *                **        *             *            *  *   
CCCTGCACCGAAcATGGAGAaCACaACATCAGGATTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTCTTGTTGA
      g     t       g   cg                           c           t            
            a                                                                   
                                                                                
                                                                                

      1210      1220      1230      1240      1250      1260      1270      1280
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
      * *             *        *             *   *           **                *
CAAGAATCCTCACAATACCACAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAGCACCCACGTGTCCT
   a               g g                             g           a      aga       
                                                                        t       
                                                                        g       
                                                                                

      1290      1300      1310      1320      1330      1340      1350      1360
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
           *  *   *        *           *                 *      *         *     
GGCCAAAATTcGCAGTCCCCAACCTCCAATCACTCACCAACCTCTTGTCCTCCAAtTTGTCCTGGcTATCGCTGGATGTG
          t                       t  t      c        g c         t     t        
                                                                 a              
                                                                                
                                                                                

      1370      1380      1390      1400      1410      1420      1430      1440
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
            *   *          *     *       * *     * *                  *         
TCTGCGGCGTTTTATCATaTTCCTCTTCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTACCAAGGTA
           c      c                            c      a g       g    t gt gg    
                                                                                
                                                                                
                                                                                

      1450      1460      1470      1480      1490      1500      1510      1520
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*       *                                                                       
TGTTGCCCGTTTGTCCTCTACTTCCAGGAA------CATCAA---CtAC------------CA------------GCACG
                    a        t       ta       c              a             ct  a
                                     c        a                                 
                                                                                
                                                                                

      1530      1540      1550      1560      1570      1580      1590      1600
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                   *         *       *     *    
GGACCATGCAAGACCTGCACGAtTCCTGCTCAAGGAACCTCTATGTTTCCCTCTTGTTGCTGTACAAAACCTTCGGACGG
  g  c    ga        a ca         a c a     c a       a  c                    ta 
                      g                                                         
                                                                                
                                                                                

      1610      1620      1630      1640      1650      1660      1670      1680
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
       *     *    *   **             *             ** *        *     *          
AAAcTGCACTTGTATTCCCATCCCATCATCcTGGGCTTTCGCAAGATTCCTATGGGAGTGGGCCTCAGTCCGTTTCTCCT
   t     c                 g  t t        t  a                                 a 
                              a                                               t 
                                                                                
                                                                                

      1690      1700      1710      1720      1730      1740      1750      1760
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
GGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGTAGGGCTTTCCCCCACTGTTTGGCTTTCAGTTATATGGATGATG
               c               a    cc                 c          c  cg t       
                                                                                
                                                                                
                                                                                

      1770      1780      1790      1800      1810      1820      1830      1840
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *                            *      *              *                    *    
TGGTATTGGGGGCCAAGTCTGTACAACATCTTGAgTCCCTTTTTACCtCTaTTACCAATTTTCTTTTGTCTTTGGGTATA
    t        g   a                ag      a    g  g             gc a   c        
                                                                 g              
                                                                                
                                                                                

      1850      1860      1870      1880      1890      1900      1910      1920
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*              *     *   *  ** *  *    *            * *        *       * *      
CATTTgAACCCTAATAAAACCAAaCGtTGGGGcTACTCCCTTAAcTTCATGGGATATGTAATTGGAaGTTGGGGTACtTT
     a  t  cccc  g  t  ga      t  t  cc t  t     c     c     gt       a  c  
                    a                a           g     g     c        c  a  
                                                                                
                                                                                

      1930      1940      1950      1960      1970      1980      1990      2000
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 *        **          *                           *           *                 
aCCaCAgGAACATATTGTACtaAAAaTcAAgCAATGTTTTCGaAAAcTgCCTgTAAATAGaCCTATTGATTGGAAAGTaT
g  g  a  c  c  ca gtac  gc g  a  c      a gc  t t  cact   c g              g  g 
         g     a     g   t t     g        t     a     c                       c 
         t           t                    c                                     
                                                                                

      2010      2020      2030      2040      2050      2060      2070      2080
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*          *                           *        *  *    *           **  *       
GTCAaAGAATTGTGGGTCTTtTGGGcTTTGCtGCcCCtTTTACACAATGTGGcTAtCCtGCcTTaATGCCTTTaTATGCA
 c  gc g     a  g  gc a  t     c  t  c  c  g        t  c  a  ac gc     g  c  g
                c        a     g     a     t        g     c  t                  
                                                    a     g                     
                                                                                

      2090      2100      2110      2120      2130      2140      2150      2160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                  **                   *                    *  *           *  * 
TGTATACAAtCTAAGCAGGCTTTCACTTTCTCGCCAACTTACAAGGCCTTTCTGTGTAAACAATATcTGaACCTTTACCC
  c  t  cg c  a  a     t     t   t    a  t  aatt   t a   c       ca  cc      t  
        ta g                                                      t             
        g  a                                                                    
                                                                                

      2170      2180      2190      2200      2210      2220      2230      2240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                         *                                                      
CGTTGCcCGGCAACGGtCaGGTCTcTGCCAAGTGTTTGCTGACGCAACCCCCACTGGaTGGGGCTTGGCcATaGGCCATC
      ta        c c  c  t                 t              t           tc t c   ca
      g         g t     a                                c           ag g       
      a                 g                                               c       
                                                                                

      2250      2260      2270      2280      2290      2300      2310      2320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                               *                
agCGCATGCGTGGAACCTTTGTGGCTCCTCTGCCGATCCATACTGCGGAACTCCTAGCAGCTTGTTTTGCTCGCAGCcGG
gc   c              a          a           c           t  g  c     c         a  
                                                       g  c  g                  
                                                                                
                                                                                

      2330      2340      2350      2360      2370      2380      2390      2400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
    *                *                                    *    *                
TCTGGAGCgAAaCTtATCGGaACcGACAACTCTGTTGTCCTCTCTCGGAAATACACCTCcTTTCCATGGCTGCTaGGgTG
     g  a cca cc t  c  t        c  c  t  t  c  a  g     a  t  c           c  c  
              g  a  g  g        g           g  c           g                 a  
                    t                                      a                 t  
                                                                                

      2410      2420      2430      2440      2450      2460      2470      2480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     *           *                      *              **     *          *      
TGCTGCCAACTGGATCCTGCGCGGGACGTCCTTTGTCTACGTCCCGTCGGCGCTGAATCCCGCGGACGACCCgTCTCGGG
                  a     a           t           a  a        t        t  a  g  c 
                  t                                                     c  c    
                                                                                
                                                                                

      2490      2500      2510      2520      2530      2540      2550      2560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                     *                                                **        
GCCGTTTGGGaCTCTAcCGTCCCCTTCTtCgTCTGCCGTTCCGgCCGACCACGGGGCGCACCTCTCTTTACGCGGTCTCC
 t  cc    ga t  t     t     gta   a       aa  ac    a     a                aa   
          c                 c t                                                 
          t                   c                                                 
                                                                                

      2570      2580      2590      2600      2610      2620      2630      2640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                     *        *                                 
CCGTCTGTGCCTTCTCATCTGCCGGaCCGTGTGCACTTCGCTTCACCTCTGCACGTCGCAT------GGAgACCACCGTG
   aa         a g  c     t                                           ca         
                         g                                                      
                         c                                                      
                                                                                

 
.
 
A
 
 
 
 
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