HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence PreS2 of genotype B

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                       **  **
ATGCAGTGGAACTCCACCACtTTCCAcCAAACTCTTCA---AGATCCCAGAGTCAGGGCcCTGTACtTTCCTGCTGGTGG
g aagt     t  tc a ag  t  t   g    g     g  c  aca         t  a  tc c
                    c                                             y


        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
      **           *        *           *        *        *        *  ***  *   *
CTCCAGTTCAGGAACAGTgAgCCCTGCTCAGAAtACTGtCTCTgCCATATCGTCAAtCTTaTCGAAGACTGGGGACCCTG
           ag tc  a a     t     cct   c   at   c   a    c  cc    c
                                          gc               yg    m
                                           a

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     *    *      *     *    *         * *            *    *     *   *
TACCGAACATGGAGAACATCGCATCAGGACTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTCTtGTTGACAAAA
cg     t            t         a   c             ga                   c
                    a                           c                    y


       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                      *      *         *          *                   *       *
ATCCTCACAATACCACAGAGTCTAGACTCGTGGTGGACTTCTCTCAaTTTTCTAGGGGgAACACCCGTGTGTCTTGGCCA
              g                               g           ag       a     c
                                              r           rc             g


       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *   * ** *   * ** *   * *  *  *         ** *     ** **      *              **
AAATTCGCAGTCCCAAATCTCCAGTCACTCACCAACcTGTTGTCCTCCaATTTGTCCTGGTTATCGCTGGATGTGTCTGC
                       a        t   t          ag c         c     t       a



       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*      * * *   **  * *      *           *          *  *     *            *
GGCGTTTTATCATCTTCCTCTGCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTATCAAGGTATGTTG
             a     t                         c
             m


       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  *      **                      *              *          **        *
CCCGTTTGTCCTCTAATTCCAGGATCATCAACaACCAGCACCGGACCATGCAaAACCTGCACaACTCCTGCTCAAGGAAC
              cc          c  g  c        g          gg  a     gg ga      gc
              g           g     g                             r   t
                                t

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
**            *  *            *  *                *   ** ** * **       * *    **
CTCTATGTTTCCCTCATGTTGCTGTACAAAACCTACGGACGGAAACTGCACCTGTATTCCCATCCCATCATCTTGGGCTT
    tc                     c       t   t     t                          c



       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
           *   *      **         * **         *  **  *     *       **       **
TCGCAAAATaCCTATGGGAGTGGGCCTCAGTCCGTTTCTCTTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGTA
   t     t                                         c         g                c



       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
* *           *   *         *     **     * *   * **  *              *     *
GGGCTTTCCCCCACTGTCTGGCTTTCAGTTATATGGATGATGTGGTtTTGGGGGCCAAGTCTGTACAACATCTTGAGTCC
             t   t             c  t      a    a      a    aa    g     c     a
                                                          r           y


       810       820       830       840
....:....|....:....|....:....|....:....|....:....
                     *                    *
CTTTATgCCGCTGTTACCAATTTTCTTTTGTCTTTGGGTATACATTTAA
a     a           c        g a   c    c      c g
                           c