HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence PreS2 of genotype B

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                        *  **
ATGCAGTGGAACTCCACCACtTTCCAcCAAACTCTTCA---AGATCCCAGAGTCAGGGCcCTGTACtTTCCTGCTGGTGG
g aagt     t  tc a ag  t  t   g    g     g  c  aca         t  a  tc c
                    c


        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                     *      *                    *        *        *  ***  *   *
CTCCAGTTCAGGAACAGTGAgCCCTGCTCAGAAtACTGtCTCTgCCATATCGTCAAtCTTaTCGAAGACTGGGGACCCTG
           ag tc  a a     t     cct   ca  at   c   a    c  cc    c
                                          gc                g
                                           a

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
    **    *      *     *    *         * *            *    *
TACCGAACATGGAGAACATCGCATCAGGACTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTCTtGTTGACAAAA
cg     t            t         a   c             ga                c  c
                    a                           c                    y


       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                      *      *         *          *                   *       *
ATCCTCACAATACCACAGAGTCTAGACTCGTGGTGGACTTCTCTCAaTTTTCTAGGGGgAACACCCGTGTGTCTTGGCCA
              g                               g           ag       a     c
                                              r           rc


       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *   *    *     ** *   * *  *  *         ** *  *  ** *       *              **
AAATTCGCAGTCCCAAATCTCCAGTCACTCACCAACcTGTTGTCCTCCaATTTGTCCTGGTTATCGCTGGATGTGTCTGC
                       a        t   t          ag c         c             a



       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
    *   * *     **        *              *          *        **        *  *
GGCGTTTTATCATCTTCCTCTGCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTATCAAGGTATGTTG
             a     t                         c



       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  *      **                      *                       *          **        *
CCCGTTTGTCCTCTAATTCCAGGATCATCAACaACC---------AGCACCGGACCATGCAaAACCTGCACaACTCCTGC
              cc          c  g  c                 g          gg  a     gg ga
              g           g     g                                      r   t
                                t

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
         **            *  *                                *   **   ** **
TCAAGGAACCTCTATGTTTCCCTCATGTTGCTGTACAAAACCTACGGACGGAAACTGCACCTGTATTCCCATCCCATCAT
  gc         tc            c        c       t         t



       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  *    *            *   *       *         * **         *   *        *       **
CTTGGGCTTTCGCAAAATaCCTATGGGAGTGGGCCTCAGTCCGTTTCTCTTGGCTCAGTTTACTAGTGCCATTTGTTCAG
c          t     t                                         c         g
                  w


       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
      *     *           *   * *       *     **     * *     **  *              *
TGGTTCGTAGGGCTTTCCCCCACTGTCTGGCTTTCAGTTATATGGATGATGTGGTtTTGGGGGCCAAGTCTGTACAACAT
       c              t   t                t      a    a      a g  aa    g     c
                                                  t                r           y


       810       820       830       840       850
....:....|....:....|....:....|....:....|....:....|....:...
    *                            *       *
CTTGAGTCCCTTTATgCCGCTGTTACCAATTTTCTTTTGTCTTTGGGTATACATTTAA
     a   a     a           c        g a   c    c      c---
                                                        g