HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence S of genotype A

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                            **  *             *     *    ***
ATGGAGAACATCACATCAGGATTCCTAGGACCCCTGCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAGAATCCTCAC
                     c     a                              c           a



        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                     *         *    *                        *     *  *        *
AATACCGCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGatCACCCGTGTGTCTTGGCCAAAATTCGC
      a                               g           agg ta         g
                                                   cc
                                                    a

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
             *   * **  *  *                  *     * *  *             *      * *
AGTCCCCAACCTCCAATCACTCACCAACCTCCTGTCCTCCAATTTGTCCTGGTTATCGCTGGATGTGTCTGCGGCGTTTT
                               t        g c         c     t
                                          y


       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *    **    ** *   *       *   *                      *
ATCATATTCCTCTTCATCCTGC---TGCTATGCCTCATCTTCTTATTGGTTCTTCTGGATTATCAAGGTATGTTGCCCGT
                                            g     a  g     c gc  g



       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                            **        *  *
TTGTCCTCTAATTCCAGGATCaAC------AACAACCAGtACGGGACCaTGCAAAACCTGCACGACTCCTGCTCAAGGCA
                     cg          c     c      a c    gg                     a
                      t


       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
               *       *             *      *    *             * *          *  *
ACTCTATGTTTCCCTCATGTTGCTGTACAAAACCTACGGAtGGAAATTGCACCTGTATTCCCATCCCATCgTCcTGGGCT
                c     t            t    c           t                 a  t



       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  *   *    *  * **      *    ** *    *         **              *     *
TTCGCAAAATACCTATGGGAGTGGGCCTCAGTCCGTTTCTCtTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGT
          t        g           c         a                    c           r    c
                                         c


       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
          *             *      *     *        *
AGGGCTTTCCCCCACTGTTTGGCTTTCAGcTATATGGATGATGTGGTAtTGGGGGCCAAGTCTGTACAgCATCgTGAGtC
              t   c       t  t   g t      a t  tc          aa  a g  a  c t   ag
                                                           r                  k


       650       660       670       680       690
....:....|....:....|....:....|....:....|....:....|

CCTTTATACCGCTGTTACCAATTTTCTTTTGTCTcTGGGTATACATTTAA
     t            t               t    c      c---