HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence PreC of genotype A

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                         *       **  * ***   *   *** * * *  ** *
ATGCAACTTTTTCACCTCTGCCTAATCATCTCTTGTaCATGTCCCACTgTTCAAGCCTCCAAGCTGTGCCTTGGgTGGCT
c                       t       c   t       t   t                         a
                                                c


        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
**  * ****    * ***     * *  * *  **              *       **  *  *    *  *  *  *
TTGGGGCATGGACATTGACCCTTATAAAGAATTTGGAGCTACTGTGGAGTTACTCTCgTTTTTGCCTTCTGACTTCTTTC
  a  a         c   a g              c   tgc c   a  g     a         ca   t  t a
                                                         t         gt
                                                                   a

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*           *  *       **        *           *     *          *         *
CTTCcGTCaGaGATCTcCTaGAcACcGCCTCAGCTCTgTATCGgGAAGCCTTAGAGTCTCCTGAGCATTGCTCACCTCAC
    a cac g     a  tc t  a  a      t a t   a  t  ac t  a  a  g        ta cg g  t
       t        t  g     t  t        c              g                    tt


       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*   * **     **             * **     *              *       **** **     **
CATACtGCACTCAGGCAAGCCATTCTCTGCTGGGGGGAATTgATG---ACTCTAGCTACCTGGGTGGGTAATAATTTGgA
     a   a          ag  g a       ta  gg atc tacta t  cgct          c c      ac
     c                    t           tc
                                      c

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  *                       *     *  *  *          **        *  *           **
AGATCCAGCATCcAGGGATCTAGTAGTCAATTATGTTAATACTAACATGGGttTAAAgATcAGgCAAcTATTGTGGTTTC
c  c at     a  a   ta c  c a        c    a c t     cc  t ac t  a   t g
t     g     t              t                        a              a


       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*     * *        ** **          *        *   *  *    *  ** *  *** *       *
ATATaTCTTGCCTTACTTTTGGAAGAGAgACTGTaCTTGAaTATTTGGTCTCTTTcGGAGTGTGGATTCGCACTCCTCCA
c ct  c  ta    c  c      c agtg  c     g     a  t  c  t  g        a
    c                       c     t              a
                            t     g

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
    *          ** ** ****** * **    * **   *      ****  * **
GCCTATAGACCACCAAATGCCCCTATCTTATCAACACTTCCGGAAACTACTGTTGTTAGACGACGgGACCG---AGGCAG
c t  c       t                              g   g     a     tata-a-g--     c tc
  a                                                          cc  - - a


       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*     *     * *        *     **   *           ** **    *       * **  ****  *
GTCCCCTAGAAGAAGAACTCCCTCGCCTCGCAGACGcAGATCTCAATCGCCGCGTCGCAGAAGATCTCAATCTCGGGAAT
             c                      a           a          a       a         g c



       650
....:....|.

CTCAATGTTAG
c --------
          a