HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence PreC of genotype A

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                            *       **  * *** * *   *** * * *  *
ATGCAACTTTTTCACCTCTGCCTAATC---ATCTCTTGTaCATGTCCCACTgTTCAAGCCTCCAAGCTGTGCCTTGGgTG
c                       t          c   t       t   t                         a
                                                   c


        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
* ***  * ****    * ***     * *  * *  **              *       **  *  *    *  *  *
GCTTTGGGGCATGGACATTGACCCTTATAAAGAATTTGGAGCTACTGTGGAGTTACTCTCgTTTTTGCCTTCTGACTTCT
     a  a         c   a g              c   tgc c   a  g     a         ca   t  t
                                                            t         gt
                                                                      a

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  **           *  *       **        *           *     *          *         *
TTCCTTCcGTCaGaGATCTcCTaGAcACcGCCTCAGCTCTgTATCGgGAAGCCTTAGAGTCTCCTGAGCATTGCTCACCT
a      a cac g     a  tc t  a  a      t a t   a  t  ac t  a  a  g        ta cg g
          t        t  g     t  t        c              g                    tt


       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   **  * **     **             * **     *              *       **** **     **
CACCATACtGCACTCAGGCAAGCCATTCTCTGCTGGGGGGAATTgATG---ACTCTAGCTACCTGGGTGGGTAATAATTT
  t     a   a          ag  g a       ta  gg atc tacta t  cgct          c c
        c                    t           tc
                                         c

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     *                       *     *  *  *          **           *           **
GgAAGATCCAGCATCcAGGGATCTAGTAGTCAATTATGTTAATACTAACATGGGttTAAAgATcAGgCAAcTATTGTGGT
ac c  c at  t  a  a   ta c  c a        c    a c t     cc  t a  t  a   t g
   t     g     t              t                        a              a


       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *     * *        ** **          *        *   *  *    *  ** *  *** *       *
TTCATATaTCTTGCCTTACTTTTGGAAGAGAgACTGTaCTTGAaTATTTGGTCTCTTTcGGAGTGTGGATTCGCACTCCT
    c ct  c  ta    c  c      c agtg  ca    g     a  t  c  t           a
       c                       c     g              a
                               t     t

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
       *          ** ** ****** * **    * **   *      * **  * **
CCAGCCTATAGACCACCAAATGCCCCTATCTTATCAACACTTCCGGAAACTACTGTTGTTAGACGACGgGACCG---AGG
   c t  c       t                              g   g     a     tata-a-g--     c
     a          a                                               cc  -a- a


       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *     *     * *        *     **   *           ** **    *       * **  **** **
CAGGTCCCCTAGAAGAAGAACTCCCTCGCCTCGCAGACGcAGATCTCAATCGCCGCGTCGCAGAAGATCTCAATCTCGGG
tc              c                      a           a          a       a



       650
....:....|....

AATCTCAATGTTAG
g c c --------
             a