HBVdb::Dataset - Hepatitis B Virus Database

Dataset for nucleotide sequence C of genotype A

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                           **              *        *  *  *    *     *  **
ATGGACATTGACCCTTATAAAGAATTTGGAGCTACTGTGGAGTTACTCTCgTTTTTGCCTTCTGACTTCTTTCCTTCcGT
        c     g              c   tg  ca           a         ca   t  t a      a c
                                                  t         g
                                                            a

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     *  *        *        *                 *          *         *       *   * *
CaGaGATCTcCTaGAcACcGCCTCAGCTCTgTATCGaGAAGCCTTAGAGTCTCCTGAGCATTGCTCACCTCACCATACtG
ac g     a  tc t  a  a      t a t   g  tt ac t  a  a  g        ta cg g  t     a
t        t  g     t  t        c              g                    tt          c


       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*                    * **                    *       **** *      **
CACTCAGGCAAGCCATTCTCTGCTGGGGGGAATTgATG---ACTCTAGCTACCTGGGTGGGTAATAATTTGgAAGATCCA
  a           g  g a       taa tg atc tacta t  cgct          c c      ac c  c at
                   t           gc                                              g


       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                   *     *  *              *           *           **          *
GCATCCAGGGATCTAGTAGTCAATTATGTTAATACTAACATGGGttTAAAgATcAGgCAACTATTGTGGTTTCATATaTC
     a  a   ta c  c a        c    a   t     cc  t a  t  a   t g        c  c ct
                    t                       aa                c              c


       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*        **  *          *        *   *       *  **    *** *       *         *
TTGCCTTACTTTTGGAAGAGAgACTGTaCTTGAaTATTTGGTCTCTTTcGGAGTGTGGATTCGCACTCCTCCAGCCTATA
c  ta    c  c      c agtg  ca    g     a  t  c  t           a     g     gctt  c
                     t     t              a                                a
                     c     g

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
        ** *  ****** *  *    *      *      ** *  *                       *     *
GACCACCAAATGCCCCTATCTTATCAACACTTCCGGAAACTACTGTTGTTAGACGACGgGACC---gAGGCAGGTCCCCT
      a                           t   tg g     a     tata-a-g--g  - c tc
      t                                                c  - - a


       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     * *        *     **   *           ** **            * *      *  *
AGAAGAAGAACTCCCTCGCCTCGCAGACGcAGATCTCAATCGCCGCGTCGCAGAAGATCTCAATCTCGGGAATCTCAATG
      c                      a           a                  a         g c ct




....

TTAG
  -a